Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL022400.1-201ENST00000423946 935 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 USP9YP11-201ENST00000427537 717 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.26□□□□□ -2.21
CXCR4P61073 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 NEFMP1-201ENST00000443423 1006 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AL078601.1-201ENST00000444542 271 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AC104058.1-201ENST00000448028 297 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 MTCO1P27-201ENST00000448269 226 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CXCR4P61073 ZNF886P-201ENST00000450781 723 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCR4P61073 MTND1P16-201ENST00000465177 898 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.26□□□□□ -2.21
CXCR4P61073 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCR4P61073 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCR4P61073 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.26□□□□□ -2.21
CXCR4P61073 PTP4A1P4-201ENST00000512479 322 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AP005660.1-201ENST00000522972 293 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
CXCR4P61073 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCR4P61073 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.26□□□□□ -2.21
CXCR4P61073 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 MTND3P13-201ENST00000574391 343 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 CYP2C61P-201ENST00000604072 290 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AC024060.1-201ENST00000607052 494 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 AP003476.1-201ENST00000623984 516 ntBASIC1.26□□□□□ -2.21
CXCR4P61073 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CXCR4P61073 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 SNORA63.3-201ENST00000362682 132 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 RNU6-1010P-201ENST00000362757 107 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 SNORA26.9-201ENST00000391322 122 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 USP9YP33-201ENST00000412220 421 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 RPS12P24-201ENST00000412619 387 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCR4P61073 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCR4P61073 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 USP9YP35-201ENST00000435696 412 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 HMGB3P12-201ENST00000438745 556 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 RNU6-953P-201ENST00000459154 107 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCR4P61073 AC098862.1-201ENST00000504991 413 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
CXCR4P61073 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AC015720.1-201ENST00000565251 277 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 CLIC4P2-201ENST00000601934 717 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AC112220.2-201ENST00000605513 533 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AL022345.1-201ENST00000607292 135 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AC093788.1-201ENST00000609356 927 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 RMST_6.1-201ENST00000611980 203 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 uc_338.15-201ENST00000615470 191 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
CXCR4P61073 AP000943.4-201ENST00000622912 357 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 AC091965.5-201ENST00000624785 342 ntBASIC1.25□□□□□ -2.21
CXCR4P61073 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
CXCR4P61073 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCR4P61073 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CXCR4P61073 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CXCR4P61073 RNU1-58P-201ENST00000362413 163 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 RNU6-858P-201ENST00000362436 107 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 RNA5SP126-201ENST00000365092 109 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 RNA5SP190-201ENST00000365222 118 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 MIR597-201ENST00000384968 97 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 MIR186-201ENST00000384988 86 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CXCR4P61073 SNORA40C-201ENST00000391285 128 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CXCR4P61073 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CXCR4P61073 SRIP3-201ENST00000413200 219 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AC083875.1-201ENST00000419509 405 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 RAC1P6-201ENST00000423911 575 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.24□□□□□ -2.21
CXCR4P61073 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.24□□□□□ -2.21
CXCR4P61073 AC007677.1-201ENST00000445757 515 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCR4P61073 RPS3AP22-201ENST00000488297 769 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AC116337.1-201ENST00000509680 687 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCR4P61073 MTND1P36-201ENST00000522384 936 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AP003392.2-201ENST00000527269 208 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 DEFB108A-201ENST00000530110 222 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCR4P61073 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCR4P61073 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCR4P61073 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.24□□□□□ -2.21
CXCR4P61073 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CXCR4P61073 AL670379.6-201ENST00000603753 252 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AL670379.11-201ENST00000604059 253 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AL358072.1-201ENST00000604156 575 ntBASIC1.24□□□□□ -2.21
CXCR4P61073 AC010900.2-201ENST00000604508 210 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms