Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL731537.2-201ENST00000561565 951 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 SUB1P4-201ENST00000566062 339 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC104072.1-201ENST00000568817 668 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 SNORA77B-201ENST00000578179 125 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 VN1R83P-201ENST00000595685 445 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AP001981.2-201ENST00000603241 418 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AC008993.2-201ENST00000631744 806 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.06□□□□□ -2.24
AP3S2P59780 AC010149.2-201ENST00000637608 315 ntBASIC1.06□□□□□ -2.24
AP3S2P59780 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
AP3S2P59780 AP000560.1-201ENST00000624150 1937 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
AP3S2P59780 RNU6-655P-201ENST00000362858 107 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 RNU4-13P-201ENST00000364019 141 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
AP3S2P59780 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
AP3S2P59780 RSL24D1P4-201ENST00000400938 484 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AL603865.2-201ENST00000401679 213 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AC139712.2-201ENST00000424302 339 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 CST2P1-201ENST00000425770 87 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.05□□□□□ -2.24
AP3S2P59780 AL078601.1-201ENST00000444542 271 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.05□□□□□ -2.24
AP3S2P59780 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.05□□□□□ -2.24
AP3S2P59780 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.05□□□□□ -2.24
AP3S2P59780 AP001025.1-201ENST00000486139 332 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.05□□□□□ -2.24
AP3S2P59780 RPF2P2-201ENST00000504693 896 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AC098799.1-201ENST00000504752 800 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 MTND4P2-201ENST00000507767 1203 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 SNORA31.19-201ENST00000517079 126 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.05□□□□□ -2.24
AP3S2P59780 AC060771.1-201ENST00000582031 164 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.05□□□□□ -2.24
AP3S2P59780 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 MIR8063-201ENST00000621930 81 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AP000676.3-201ENST00000623299 569 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 MIR3529-201ENST00000637713 78 ntBASIC1.05□□□□□ -2.24
AP3S2P59780 AP005901.5-201ENST00000545779 1796 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 MIR302D-201ENST00000362275 68 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 RNU6-289P-201ENST00000364093 107 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 SNORD1A-201ENST00000364968 72 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
AP3S2P59780 RNU6-468P-201ENST00000384003 109 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 Y_RNA.510-201ENST00000384511 114 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 U8.13-201ENST00000390842 128 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AC119751.3-201ENST00000399720 670 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AL592045.1-201ENST00000429867 352 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AC012308.1-201ENST00000451232 178 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.04□□□□□ -2.24
AP3S2P59780 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.04□□□□□ -2.24
AP3S2P59780 MED28P2-201ENST00000475771 317 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.04□□□□□ -2.24
AP3S2P59780 YWHAEP4-201ENST00000505390 198 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 MTCYBP40-201ENST00000509390 1135 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AC024589.1-201ENST00000512207 263 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 RNU6-965P-201ENST00000516721 96 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.04□□□□□ -2.24
AP3S2P59780 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.04□□□□□ -2.24
AP3S2P59780 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AC078880.5-201ENST00000617845 421 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 AC112204.3-201ENST00000623822 332 ntBASIC1.04□□□□□ -2.24
AP3S2P59780 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
AP3S2P59780 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
AP3S2P59780 RNU6-858P-201ENST00000362436 107 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 RNU6-944P-201ENST00000364023 107 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 RNU6-160P-201ENST00000384591 107 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.03□□□□□ -2.24
AP3S2P59780 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.03□□□□□ -2.24
AP3S2P59780 MTCO2P1-201ENST00000424648 477 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.03□□□□□ -2.24
AP3S2P59780 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.03□□□□□ -2.24
AP3S2P59780 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
AP3S2P59780 FDX1P2-201ENST00000450769 375 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 RPS3AP22-201ENST00000488297 769 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 RPL30P1-201ENST00000488676 339 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 FAM92A1P2-202ENST00000504766 877 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 HMGN1P13-201ENST00000505795 138 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC093259.1-201ENST00000509755 300 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AP003033.1-201ENST00000527244 415 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.03□□□□□ -2.24
AP3S2P59780 AC090115.3-201ENST00000553218 849 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.03□□□□□ -2.24
AP3S2P59780 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 MIR6845-201ENST00000613182 61 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.03□□□□□ -2.24
AP3S2P59780 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
AP3S2P59780 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
AP3S2P59780 SNORD114-1-201ENST00000362705 72 ntBASIC1.02□□□□□ -2.25
AP3S2P59780 RNU6-743P-201ENST00000364151 106 ntBASIC1.02□□□□□ -2.25
AP3S2P59780 RNU6-487P-201ENST00000365430 104 ntBASIC1.02□□□□□ -2.25
AP3S2P59780 MIR29B2-201ENST00000385055 81 ntBASIC1.02□□□□□ -2.25
AP3S2P59780 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms