Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-928P-201ENST00000516876 104 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC022695.1-201ENST00000522089 237 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.42□□□□□ -1.86
CLRN1P58418 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.42□□□□□ -1.86
CLRN1P58418 AC090877.1-201ENST00000561418 344 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR5701-3-201ENST00000578890 82 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR3149-201ENST00000584629 83 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR5701-1-201ENST00000585138 82 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC110741.2-201ENST00000605278 268 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AL121655.1-201ENST00000605811 308 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR1244-1-201ENST00000612829 85 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR5701-2-201ENST00000615634 82 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN1P58418 ZYXP1-201ENST00000617638 118 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR1244-3-201ENST00000635744 85 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR1244-2-201ENST00000636449 85 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR1244-4-202ENST00000636813 85 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN1P58418 MAPK10-253ENST00000641010 4072 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC022336.2-201ENST00000568966 2538 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN1P58418 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN1P58418 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 MIR372-201ENST00000362225 67 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 Y_RNA.176-201ENST00000363815 109 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 RNU6-595P-201ENST00000363944 107 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.41□□□□□ -1.86
CLRN1P58418 TRBV12-2-201ENST00000489763 344 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 AC010265.1-201ENST00000513509 211 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 RNU6-635P-201ENST00000516651 102 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 SNORA43.2-201ENST00000516652 128 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.41□□□□□ -1.86
CLRN1P58418 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.41□□□□□ -1.86
CLRN1P58418 AC004584.2-201ENST00000570407 410 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 MIR4644-201ENST00000579929 84 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 AC012468.1-201ENST00000604888 430 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 BRDTP1-201ENST00000605735 677 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 AC009318.2-201ENST00000610917 651 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.41□□□□□ -1.86
CLRN1P58418 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.41□□□□□ -1.86
CLRN1P58418 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CLRN1P58418 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLRN1P58418 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLRN1P58418 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CLRN1P58418 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CLRN1P58418 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLRN1P58418 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLRN1P58418 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLRN1P58418 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLRN1P58418 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.86
CLRN1P58418 RNU6-227P-201ENST00000362865 103 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RNU6-238P-201ENST00000363313 106 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RNA5SP283-201ENST00000365604 119 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 Y_RNA.452-201ENST00000384202 108 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 MIR625-201ENST00000385047 85 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RPL21P17-201ENST00000397467 475 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 MIR888-201ENST00000401186 77 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 HSPE1P26-201ENST00000405341 275 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.4□□□□□ -1.87
CLRN1P58418 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.4□□□□□ -1.87
CLRN1P58418 OR4C10P-201ENST00000434991 931 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RPL37P4-201ENST00000448908 268 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RNU7-169P-201ENST00000459456 61 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.4□□□□□ -1.87
CLRN1P58418 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.4□□□□□ -1.87
CLRN1P58418 RNA5SP143-201ENST00000516936 115 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 RNU7-4P-201ENST00000516961 62 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AP004607.1-201ENST00000524456 203 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AC010186.2-204ENST00000537668 439 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 MIR5188-201ENST00000583467 113 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AC020895.1-201ENST00000595362 272 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AC124312.5-201ENST00000604451 268 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AL137849.1-201ENST00000604767 169 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
CLRN1P58418 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.4□□□□□ -1.87
CLRN1P58418 AC138305.3-201ENST00000624988 240 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.4□□□□□ -1.87
CLRN1P58418 AC066616.2-201ENST00000559334 1481 ntBASIC3.4□□□□□ -1.87
CLRN1P58418 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLRN1P58418 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLRN1P58418 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CLRN1P58418 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLRN1P58418 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLRN1P58418 FAM35BP-202ENST00000497389 3337 ntBASIC3.39□□□□□ -1.87
CLRN1P58418 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
CLRN1P58418 AC006504.1-201ENST00000562493 3666 ntBASIC3.39□□□□□ -1.87
CLRN1P58418 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms