Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AP000949.1-201ENST00000438328 629 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 AC093801.2-201ENST00000503966 1050 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 RNU6-64P-201ENST00000517119 105 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.46□□□□□ -2.18
CASQ1P31415 RPL21P5-201ENST00000554662 472 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 AC068338.1-201ENST00000565567 176 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 AC005668.1-201ENST00000571142 476 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 MIR7843-201ENST00000622274 79 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 AC092656.1-203ENST00000624134 423 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.46□□□□□ -2.18
CASQ1P31415 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 DDX43P2-201ENST00000604753 1354 ntBASIC1.46□□□□□ -2.18
CASQ1P31415 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CASQ1P31415 Y_RNA.510-201ENST00000384511 114 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 RNU6-817P-201ENST00000391083 104 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 SNORA40C-201ENST00000391285 128 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.45□□□□□ -2.18
CASQ1P31415 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.45□□□□□ -2.18
CASQ1P31415 RPS3AP22-201ENST00000488297 769 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CASQ1P31415 AP006587.4-201ENST00000526053 529 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 BNIP3P30-201ENST00000601184 574 ntBASIC1.45□□□□□ -2.18
CASQ1P31415 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CASQ1P31415 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CASQ1P31415 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CASQ1P31415 RNU5B-4P-201ENST00000363508 111 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RNU6-414P-201ENST00000363705 104 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 MIR29B2-201ENST00000385055 81 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 MIR1267-201ENST00000408723 78 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RNU2-41P-201ENST00000410991 178 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.44□□□□□ -2.18
CASQ1P31415 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.44□□□□□ -2.18
CASQ1P31415 AL953862.1-201ENST00000423016 168 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 FDX1P2-201ENST00000450769 375 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 DUXAP8-207ENST00000456786 622 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RPS26P55-201ENST00000471178 356 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RNU6-965P-201ENST00000516721 96 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.44□□□□□ -2.18
CASQ1P31415 TRAV32-201ENST00000553993 340 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AL132657.2-201ENST00000564417 358 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RPL21P136-201ENST00000605378 396 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 MIR6798-201ENST00000612887 67 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AC091834.1-201ENST00000614543 472 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AC008993.2-201ENST00000631744 806 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 AL512643.1-201ENST00000635735 524 ntBASIC1.44□□□□□ -2.18
CASQ1P31415 RNU4-13P-201ENST00000364019 141 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 RNU6-743P-201ENST00000364151 106 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 snoZ40.1-201ENST00000364540 72 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 RNU6-487P-201ENST00000365430 104 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 RNU6-843P-201ENST00000384454 104 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 UBE2V1P2-201ENST00000397758 440 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CASQ1P31415 AL590084.1-201ENST00000407885 387 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.43□□□□□ -2.18
CASQ1P31415 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.43□□□□□ -2.18
CASQ1P31415 MTCO3P5-201ENST00000433620 714 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.43□□□□□ -2.18
CASQ1P31415 RPL23AP35-201ENST00000451906 501 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AC010409.1-201ENST00000487382 476 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 MTCYBP40-201ENST00000509390 1135 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AC093259.1-201ENST00000509755 300 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.43□□□□□ -2.18
CASQ1P31415 AC015720.1-201ENST00000565251 277 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AC136618.2-201ENST00000575091 400 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 MIR4293-201ENST00000584305 78 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 AL355802.3-201ENST00000607571 545 ntBASIC1.43□□□□□ -2.18
CASQ1P31415 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.43□□□□□ -2.18
CASQ1P31415 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.42□□□□□ -2.18
CASQ1P31415 MIR449A-201ENST00000362113 91 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RNU6-1210P-201ENST00000363775 107 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RNU6-944P-201ENST00000364023 107 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CASQ1P31415 RNU6-160P-201ENST00000384591 107 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RNU6-14P-201ENST00000384630 106 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 U8.13-201ENST00000390842 128 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 CBX3P9-201ENST00000402326 552 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RNU4-26P-201ENST00000410270 107 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 UBE2V1P10-201ENST00000414685 269 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 NEFMP1-201ENST00000443423 1006 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC003071.1-201ENST00000451219 789 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RNU6-953P-201ENST00000459154 107 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC087477.1-201ENST00000465747 340 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 YWHAEP4-201ENST00000505390 198 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.42□□□□□ -2.18
CASQ1P31415 AP003122.4-201ENST00000530980 758 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 RPS3AP4-201ENST00000555161 764 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.42□□□□□ -2.18
CASQ1P31415 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CASQ1P31415 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.42□□□□□ -2.18
CASQ1P31415 MIR6845-201ENST00000613182 61 ntBASIC1.42□□□□□ -2.18
CASQ1P31415 AC021755.4-201ENST00000616620 456 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms