Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 OR51H2P-202ENST00000641424 3046 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL9A1P20849 MIR200C-201ENST00000384980 68 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 MIRLET7F2-201ENST00000385277 83 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 U6atac.2-201ENST00000408644 118 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 RNU6-383P-201ENST00000410864 94 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 Y_RNA.622-201ENST00000411091 108 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 AC244098.2-201ENST00000422068 99 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 NDUFB4P8-201ENST00000435351 367 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 HSPE1P21-201ENST00000438283 308 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 Z75741.1-201ENST00000446793 314 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 SNRPGP8-201ENST00000454064 226 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.23□□□□□ -1.57
COL9A1P20849 AC010285.1-201ENST00000470580 392 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 AC103975.1-201ENST00000482506 483 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.23□□□□□ -1.57
COL9A1P20849 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.23□□□□□ -1.57
COL9A1P20849 MIR4513-201ENST00000581077 86 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 AL031274.2-201ENST00000599419 203 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 AC108738.1-201ENST00000603703 237 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL9A1P20849 AC068205.3-201ENST00000636385 468 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL9A1P20849 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.23□□□□□ -1.57
COL9A1P20849 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL9A1P20849 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL9A1P20849 A2MP1-204ENST00000566278 4130 ntBASIC5.23□□□□□ -1.57
COL9A1P20849 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL9A1P20849 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 AC025031.4-201ENST00000621248 3271 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
COL9A1P20849 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 AC068647.1-201ENST00000489539 2265 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.22□□□□□ -1.57
COL9A1P20849 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL9A1P20849 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.22□□□□□ -1.57
COL9A1P20849 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 RNU6-487P-201ENST00000365430 104 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 RNU6-628P-201ENST00000410675 107 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.22□□□□□ -1.57
COL9A1P20849 AL365496.1-201ENST00000426885 215 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.22□□□□□ -1.57
COL9A1P20849 RN7SL319P-201ENST00000480656 221 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.22□□□□□ -1.57
COL9A1P20849 AC027176.1-201ENST00000560204 514 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 RPL30P11-203ENST00000598995 310 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AL591034.3-201ENST00000605511 685 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AC025754.2-201ENST00000606491 432 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 AL139124.1-201ENST00000609123 421 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL9A1P20849 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL9A1P20849 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 AC083843.2-201ENST00000568248 6253 ntBASIC5.22□□□□□ -1.57
COL9A1P20849 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL9A1P20849 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL9A1P20849 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
COL9A1P20849 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL9A1P20849 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL9A1P20849 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 RNU6-640P-201ENST00000363693 105 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 AP002088.1-201ENST00000382740 395 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 RNU6-1279P-201ENST00000383917 103 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.21□□□□□ -1.58
COL9A1P20849 RNU6-197P-201ENST00000516680 100 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 SNORA70.24-201ENST00000517233 118 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.21□□□□□ -1.58
COL9A1P20849 AC090897.2-201ENST00000581715 130 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 AC025166.1-201ENST00000612411 163 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 AL021997.2-201ENST00000615674 271 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 uc_338.7-201ENST00000621834 124 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 AC006065.5-201ENST00000623427 349 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.58
COL9A1P20849 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL9A1P20849 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL9A1P20849 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.2□□□□□ -1.58
COL9A1P20849 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.2□□□□□ -1.58
COL9A1P20849 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.2□□□□□ -1.58
COL9A1P20849 RNU6-766P-201ENST00000362478 107 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 RNU6-978P-201ENST00000364371 103 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 Y_RNA.281-201ENST00000364774 94 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 RNU6-1280P-201ENST00000365211 107 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 U1.1-201ENST00000384101 164 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 RNU6-217P-201ENST00000384164 104 ntBASIC5.2□□□□□ -1.58
COL9A1P20849 RNU6-554P-201ENST00000410466 106 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms