Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.85□□□□□ -2.27
CXCL1P09341 MTND5P14-201ENST00000441481 1267 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 BTF3P15-201ENST00000455606 336 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 AC010409.1-201ENST00000487382 476 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.85□□□□□ -2.27
CXCL1P09341 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.85□□□□□ -2.27
CXCL1P09341 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.85□□□□□ -2.27
CXCL1P09341 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.85□□□□□ -2.27
CXCL1P09341 AC019288.1-201ENST00000557918 224 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 MIR4513-201ENST00000581077 86 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 AC090517.3-201ENST00000625170 141 ntBASIC0.85□□□□□ -2.27
CXCL1P09341 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.85□□□□□ -2.27
CXCL1P09341 RNU4-91P-201ENST00000364778 135 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 RNU6-898P-201ENST00000365627 104 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
CXCL1P09341 RPL37P10-201ENST00000412884 288 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 CST2P1-201ENST00000425770 87 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 AC092634.2-201ENST00000428146 1010 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.84□□□□□ -2.27
CXCL1P09341 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.84□□□□□ -2.27
CXCL1P09341 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.84□□□□□ -2.27
CXCL1P09341 MTND2P30-201ENST00000456663 382 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.84□□□□□ -2.27
CXCL1P09341 AC009902.1-201ENST00000519351 183 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.84□□□□□ -2.27
CXCL1P09341 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.84□□□□□ -2.27
CXCL1P09341 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.84□□□□□ -2.27
CXCL1P09341 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.84□□□□□ -2.27
CXCL1P09341 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.84□□□□□ -2.27
CXCL1P09341 AP001981.2-201ENST00000603241 418 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 AC099654.9-201ENST00000637055 678 ntBASIC0.84□□□□□ -2.27
CXCL1P09341 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.84□□□□□ -2.28
CXCL1P09341 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.84□□□□□ -2.28
CXCL1P09341 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CXCL1P09341 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.83□□□□□ -2.28
CXCL1P09341 Y_RNA.111-201ENST00000363248 100 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 RNU5B-1-201ENST00000363286 116 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 RNU6-288P-201ENST00000363690 104 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 SNORA25.8-201ENST00000364831 128 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 MTCO1P56-201ENST00000401674 224 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AL079342.2-201ENST00000403367 482 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 RNU2-42P-201ENST00000410697 113 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.83□□□□□ -2.28
CXCL1P09341 HMGB1P27-201ENST00000431429 603 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AC027119.1-201ENST00000440877 241 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 CR769776.1-201ENST00000441254 787 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 RPL39P29-201ENST00000447779 157 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 MTND1P31-201ENST00000449206 961 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.83□□□□□ -2.28
CXCL1P09341 AC104629.1-201ENST00000494226 508 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.83□□□□□ -2.28
CXCL1P09341 RNU1-92P-201ENST00000517017 135 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.83□□□□□ -2.28
CXCL1P09341 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.83□□□□□ -2.28
CXCL1P09341 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CXCL1P09341 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.83□□□□□ -2.28
CXCL1P09341 AL133153.1-201ENST00000557756 303 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 MIR4421-201ENST00000578133 69 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 uc_338.15-201ENST00000615470 191 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AC093648.1-201ENST00000623546 606 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 AP003485.1-201ENST00000625093 753 ntBASIC0.83□□□□□ -2.28
CXCL1P09341 SNORD33-201ENST00000362761 85 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 RNU6-487P-201ENST00000365430 104 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CXCL1P09341 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CXCL1P09341 AC119751.3-201ENST00000399720 670 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 FTH1P15-201ENST00000406984 280 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 RPS27P16-201ENST00000425758 201 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.82□□□□□ -2.28
CXCL1P09341 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.82□□□□□ -2.28
CXCL1P09341 AC108729.1-201ENST00000487812 947 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.82□□□□□ -2.28
CXCL1P09341 RPF2P2-201ENST00000504693 896 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.82□□□□□ -2.28
CXCL1P09341 RNU6-1225P-201ENST00000516336 65 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.82□□□□□ -2.28
CXCL1P09341 MTCO3P15-201ENST00000526563 574 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC027807.1-201ENST00000559921 996 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.82□□□□□ -2.28
CXCL1P09341 AC136618.2-201ENST00000575091 400 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC069545.1-201ENST00000605671 358 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC012360.2-201ENST00000609349 391 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 Z82243.1-201ENST00000609432 473 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 uc_338.12-201ENST00000616344 181 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC093875.1-201ENST00000623688 504 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 AC008993.2-201ENST00000631744 806 ntBASIC0.82□□□□□ -2.28
CXCL1P09341 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CXCL1P09341 RNU6-354P-201ENST00000383862 107 ntBASIC0.81□□□□□ -2.28
CXCL1P09341 RNU6-610P-201ENST00000384264 107 ntBASIC0.81□□□□□ -2.28
CXCL1P09341 MIR1267-201ENST00000408723 78 ntBASIC0.81□□□□□ -2.28
CXCL1P09341 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.81□□□□□ -2.28
CXCL1P09341 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.81□□□□□ -2.28
CXCL1P09341 TOMM20P4-201ENST00000427861 435 ntBASIC0.81□□□□□ -2.28
CXCL1P09341 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.81□□□□□ -2.28
CXCL1P09341 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.81□□□□□ -2.28
CXCL1P09341 RPL32P28-201ENST00000443577 397 ntBASIC0.81□□□□□ -2.28
CXCL1P09341 USP9YP17-201ENST00000444617 696 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms