Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU1-148P-201ENST00000384472 162 ntBASIC1.73□□□□□ -2.13
CD74P04233 MIR301A-201ENST00000385261 86 ntBASIC1.73□□□□□ -2.13
CD74P04233 MIR147B-201ENST00000390185 80 ntBASIC1.73□□□□□ -2.13
CD74P04233 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
CD74P04233 AL135786.1-201ENST00000415892 214 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.73□□□□□ -2.13
CD74P04233 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.73□□□□□ -2.13
CD74P04233 Z98742.2-201ENST00000431564 187 ntBASIC1.73□□□□□ -2.13
CD74P04233 RPL23AP30-201ENST00000432419 501 ntBASIC1.73□□□□□ -2.13
CD74P04233 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.73□□□□□ -2.13
CD74P04233 AL121890.1-201ENST00000435457 205 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.73□□□□□ -2.13
CD74P04233 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.73□□□□□ -2.13
CD74P04233 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.73□□□□□ -2.13
CD74P04233 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
CD74P04233 AC007182.2-201ENST00000489251 402 ntBASIC1.73□□□□□ -2.13
CD74P04233 AF213884.2-201ENST00000510417 903 ntBASIC1.73□□□□□ -2.13
CD74P04233 SNORA25.11-201ENST00000515935 105 ntBASIC1.73□□□□□ -2.13
CD74P04233 RNU1-41P-201ENST00000516161 162 ntBASIC1.73□□□□□ -2.13
CD74P04233 RNU1-48P-201ENST00000516400 162 ntBASIC1.73□□□□□ -2.13
CD74P04233 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CD74P04233 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.73□□□□□ -2.13
CD74P04233 AC084851.1-201ENST00000529105 249 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC022878.1-201ENST00000530684 149 ntBASIC1.73□□□□□ -2.13
CD74P04233 OR5B19P-201ENST00000531766 928 ntBASIC1.73□□□□□ -2.13
CD74P04233 MIR3915-201ENST00000578518 97 ntBASIC1.73□□□□□ -2.13
CD74P04233 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
CD74P04233 AC012065.4-201ENST00000602445 679 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC091152.3-201ENST00000604227 325 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC007938.3-201ENST00000604965 623 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC092354.1-201ENST00000606057 376 ntBASIC1.73□□□□□ -2.13
CD74P04233 MIR15A-201ENST00000607334 83 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC138749.5-201ENST00000611461 208 ntBASIC1.73□□□□□ -2.13
CD74P04233 AC116165.2-201ENST00000616705 206 ntBASIC1.73□□□□□ -2.13
CD74P04233 AP000770.2-201ENST00000623694 100 ntBASIC1.73□□□□□ -2.13
CD74P04233 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
CD74P04233 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CD74P04233 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CD74P04233 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CD74P04233 RNU4-1-201ENST00000363925 141 ntBASIC1.72□□□□□ -2.13
CD74P04233 RNU6-960P-201ENST00000364056 120 ntBASIC1.72□□□□□ -2.13
CD74P04233 Z98749.2-208ENST00000381646 500 ntBASIC1.72□□□□□ -2.13
CD74P04233 Y_RNA.534-201ENST00000384599 112 ntBASIC1.72□□□□□ -2.13
CD74P04233 RNU6-19P-201ENST00000384718 107 ntBASIC1.72□□□□□ -2.13
CD74P04233 Y_RNA.598-201ENST00000410480 95 ntBASIC1.72□□□□□ -2.13
CD74P04233 RNU6-1025P-201ENST00000410629 104 ntBASIC1.72□□□□□ -2.13
CD74P04233 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
CD74P04233 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 AC114491.1-201ENST00000416095 246 ntBASIC1.72□□□□□ -2.13
CD74P04233 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 Z99497.1-201ENST00000421282 135 ntBASIC1.72□□□□□ -2.13
CD74P04233 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.72□□□□□ -2.13
CD74P04233 AC137499.1-201ENST00000427602 88 ntBASIC1.72□□□□□ -2.13
CD74P04233 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 RPL30P4-201ENST00000429309 333 ntBASIC1.72□□□□□ -2.13
CD74P04233 FABP5P14-201ENST00000437273 393 ntBASIC1.72□□□□□ -2.13
CD74P04233 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC091965.2-201ENST00000512324 613 ntBASIC1.72□□□□□ -2.13
CD74P04233 RNA5SP281-201ENST00000516504 135 ntBASIC1.72□□□□□ -2.13
CD74P04233 SNORA31.19-201ENST00000517079 126 ntBASIC1.72□□□□□ -2.13
CD74P04233 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 RPL21P5-201ENST00000554662 472 ntBASIC1.72□□□□□ -2.13
CD74P04233 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 MIR3126-201ENST00000577443 74 ntBASIC1.72□□□□□ -2.13
CD74P04233 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.72□□□□□ -2.13
CD74P04233 AC009977.1-201ENST00000586015 570 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
CD74P04233 AP002360.4-201ENST00000606980 481 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 AC087241.4-201ENST00000612441 480 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC005296.1-201ENST00000616145 209 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC091931.1-201ENST00000623488 728 ntBASIC1.72□□□□□ -2.13
CD74P04233 AC099654.13-201ENST00000639774 207 ntBASIC1.72□□□□□ -2.13
CD74P04233 AL354685.2-201ENST00000448218 1447 ntBASIC1.72□□□□□ -2.13
CD74P04233 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.72□□□□□ -2.13
CD74P04233 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CD74P04233 RNY4P34-201ENST00000364779 95 ntBASIC1.71□□□□□ -2.14
CD74P04233 RNU6-1280P-201ENST00000365211 107 ntBASIC1.71□□□□□ -2.14
CD74P04233 AL133475.1-201ENST00000404414 305 ntBASIC1.71□□□□□ -2.14
CD74P04233 SNORA3.2-201ENST00000408221 125 ntBASIC1.71□□□□□ -2.14
CD74P04233 MIR1261-201ENST00000408659 82 ntBASIC1.71□□□□□ -2.14
CD74P04233 RNU4-53P-201ENST00000410828 140 ntBASIC1.71□□□□□ -2.14
CD74P04233 AC127391.1-201ENST00000411737 98 ntBASIC1.71□□□□□ -2.14
CD74P04233 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.71□□□□□ -2.14
CD74P04233 AL365203.2-201ENST00000423444 196 ntBASIC1.71□□□□□ -2.14
CD74P04233 PTGES3P4-201ENST00000426243 356 ntBASIC1.71□□□□□ -2.14
CD74P04233 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.71□□□□□ -2.14
CD74P04233 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.71□□□□□ -2.14
CD74P04233 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.71□□□□□ -2.14
CD74P04233 BRK1P2-201ENST00000442875 223 ntBASIC1.71□□□□□ -2.14
CD74P04233 TAF9P1-201ENST00000445421 515 ntBASIC1.71□□□□□ -2.14
CD74P04233 FTH1P25-201ENST00000447665 469 ntBASIC1.71□□□□□ -2.14
CD74P04233 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms