Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCD1O75127 MIR5701-3-201ENST00000578890 82 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 MIR5701-1-201ENST00000585138 82 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 AC096577.2-201ENST00000611455 153 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 MIR5701-2-201ENST00000615634 82 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 AL450472.1-202ENST00000637286 180 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.02□□□□□ -1.61
PTCD1O75127 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.02□□□□□ -1.61
PTCD1O75127 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PTCD1O75127 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCD1O75127 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PTCD1O75127 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PTCD1O75127 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCD1O75127 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 Y_RNA.84-201ENST00000363011 104 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 RNU6-525P-201ENST00000363685 104 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 SNORD50B-201ENST00000364995 70 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 SNORA9-201ENST00000384215 133 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 Y_RNA.471-201ENST00000384312 102 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 SNORA40C-201ENST00000391285 128 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 RPL12P18-201ENST00000437175 325 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.01□□□□□ -1.61
PTCD1O75127 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.01□□□□□ -1.61
PTCD1O75127 AC107393.1-201ENST00000512403 346 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 RNU6-346P-201ENST00000516288 111 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 SNORA31.8-201ENST00000516327 108 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 SNORA70.16-201ENST00000516390 95 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 AC109479.2-201ENST00000517842 174 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 MIR5696-201ENST00000578474 85 ntBASIC5.01□□□□□ -1.61
PTCD1O75127 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.01□□□□□ -1.61
PTCD1O75127 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.01□□□□□ -1.61
PTCD1O75127 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTCD1O75127 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5□□□□□ -1.61
PTCD1O75127 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCD1O75127 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCD1O75127 U3.6-201ENST00000363622 211 ntBASIC5□□□□□ -1.61
PTCD1O75127 RNU6-740P-201ENST00000364734 105 ntBASIC5□□□□□ -1.61
PTCD1O75127 Y_RNA.277-201ENST00000364754 102 ntBASIC5□□□□□ -1.61
PTCD1O75127 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTCD1O75127 RNU6-166P-201ENST00000384371 107 ntBASIC5□□□□□ -1.61
PTCD1O75127 MIR183-201ENST00000384958 110 ntBASIC5□□□□□ -1.61
PTCD1O75127 Y_RNA.592-201ENST00000410274 109 ntBASIC5□□□□□ -1.61
PTCD1O75127 RNA5SP494-201ENST00000410653 129 ntBASIC5□□□□□ -1.61
PTCD1O75127 RNU2-68P-201ENST00000410878 191 ntBASIC5□□□□□ -1.61
PTCD1O75127 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5□□□□□ -1.61
PTCD1O75127 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5□□□□□ -1.61
PTCD1O75127 SETP5-201ENST00000437270 562 ntBASIC5□□□□□ -1.61
PTCD1O75127 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5□□□□□ -1.61
PTCD1O75127 ANP32BP2-201ENST00000454525 545 ntBASIC5□□□□□ -1.61
PTCD1O75127 AC092798.1-201ENST00000458542 409 ntBASIC5□□□□□ -1.61
PTCD1O75127 snoU109.2-201ENST00000459316 135 ntBASIC5□□□□□ -1.61
PTCD1O75127 RNU6-1073P-201ENST00000517182 106 ntBASIC5□□□□□ -1.61
PTCD1O75127 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5□□□□□ -1.61
PTCD1O75127 AC021753.1-201ENST00000635724 168 ntBASIC5□□□□□ -1.61
PTCD1O75127 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5□□□□□ -1.61
PTCD1O75127 MFSD8-236ENST00000641509 4050 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCD1O75127 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 Y_RNA.170-201ENST00000363746 110 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 MIR34B-201ENST00000385076 84 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCD1O75127 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCD1O75127 AL078601.1-201ENST00000444542 271 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCD1O75127 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCD1O75127 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCD1O75127 RNU6-377P-201ENST00000515965 102 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 AP002770.2-201ENST00000543613 532 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCD1O75127 MIR3200-201ENST00000580767 85 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 AL139395.1-201ENST00000603662 160 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 BMS1P21-201ENST00000634565 365 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 U6.105-201ENST00000637379 88 ntBASIC4.99□□□□□ -1.61
PTCD1O75127 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCD1O75127 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCD1O75127 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTCD1O75127 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCD1O75127 Y_RNA.54-201ENST00000362766 105 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 Y_RNA.200-201ENST00000364018 102 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 RNU6-708P-201ENST00000384217 107 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 MIR1251-201ENST00000408552 70 ntBASIC4.98□□□□□ -1.61
PTCD1O75127 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms