Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 U3.44-201ENST00000458938 192 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RNU6-1037P-201ENST00000459571 107 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RN7SL271P-201ENST00000487601 295 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 HMGB1P35-201ENST00000503360 598 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 HMGB3P17-201ENST00000504195 649 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RNU6-397P-201ENST00000516226 104 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AP003730.1-201ENST00000524605 285 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 CASP1P1-201ENST00000526345 212 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AP003733.2-201ENST00000529409 171 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AL121917.1-203ENST00000605534 577 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 MIR1244-1-201ENST00000612829 85 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RMST_4.1-201ENST00000616886 107 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AL512643.1-201ENST00000635735 524 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 MIR1244-3-201ENST00000635744 85 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 MIR1244-2-201ENST00000636449 85 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 Z99571.1-201ENST00000636677 394 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 MIR1244-4-202ENST00000636813 85 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC007256.1-201ENST00000392253 2765 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 UBE2L2-201ENST00000254302 429 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNA5SP443-201ENST00000363083 132 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNA5SP399-201ENST00000364003 117 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-200P-201ENST00000364743 107 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 U1.1-201ENST00000384101 164 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.471-201ENST00000384312 102 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.533-201ENST00000384596 114 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-33P-201ENST00000384793 107 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR301A-201ENST00000385261 86 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 SNORA69.1-201ENST00000390904 137 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-700P-201ENST00000391043 107 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR548M-201ENST00000408260 86 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR548H3-201ENST00000408771 118 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 Z85995.1-201ENST00000415547 335 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC092423.1-201ENST00000430165 186 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 TBCAP1-201ENST00000436520 327 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC083863.1-201ENST00000438811 231 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RANP8-201ENST00000444720 713 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 HMGN2P13-201ENST00000476476 274 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC146944.2-203ENST00000502493 354 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC139495.1-202ENST00000513164 354 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-138P-201ENST00000515952 107 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.673-201ENST00000516306 88 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR892C-201ENST00000516410 77 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-182P-201ENST00000516970 105 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-570P-201ENST00000517051 105 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 RRN3P3-201ENST00000549207 578 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 TRAV28-201ENST00000557548 323 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR3609-201ENST00000582661 80 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC002545.1-201ENST00000592511 181 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 IPO5P1-202ENST00000600039 287 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 AC107294.1-201ENST00000609524 467 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MIR6868-201ENST00000611215 58 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.17□□□□□ -1.9
CGB1A6NKQ9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CGB1A6NKQ9 ZNF299P-201ENST00000406845 1804 ntBASIC3.16□□□□□ -1.9
CGB1A6NKQ9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.16□□□□□ -1.9
CGB1A6NKQ9 AC126755.2-208ENST00000327792 462 ntBASIC3.16□□□□□ -1.9
CGB1A6NKQ9 AC138969.1-213ENST00000331436 462 ntBASIC3.16□□□□□ -1.9
CGB1A6NKQ9 RNU6-212P-201ENST00000362642 104 ntBASIC3.16□□□□□ -1.9
CGB1A6NKQ9 RNU6-611P-201ENST00000384276 104 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms