Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 MIR4782-201ENST00000577987 79 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 MIR4474-201ENST00000579189 78 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC243960.4-201ENST00000600532 288 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC104237.2-201ENST00000612456 443 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 uc_338.15-201ENST00000615470 191 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC073308.1-201ENST00000623696 305 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 Z69720.2-201ENST00000624755 279 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 U6.99-201ENST00000637524 83 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.356-201ENST00000365475 113 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.474-201ENST00000384341 102 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR449B-201ENST00000384995 97 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR10A-201ENST00000385043 110 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR34A-201ENST00000385130 110 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 RPL5P18-201ENST00000406671 891 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR548K-201ENST00000408406 116 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC010099.1-201ENST00000455434 375 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 RPS27AP10-201ENST00000496103 208 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC008526.1-201ENST00000509149 338 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 SNORA31.1-201ENST00000515993 133 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 SNORA31.5-201ENST00000516190 133 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-277P-201ENST00000516272 106 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC093331.1-201ENST00000521474 169 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 NACAP3-201ENST00000552100 481 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 LINC00933-203ENST00000559812 219 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR5680-201ENST00000577577 84 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AL670379.10-201ENST00000604330 253 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AP000787.2-201ENST00000604432 568 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AL670379.9-201ENST00000605428 253 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 MIR8058-201ENST00000615737 89 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 AC112487.2-201ENST00000637950 304 ntBASIC3.06□□□□□ -1.92
TCRBV7S3A2A0A539 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 ZNF519P1-201ENST00000449011 1626 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 SNORA71.3-201ENST00000362582 128 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.509-201ENST00000384506 99 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 MIR518D-201ENST00000385014 87 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AL356057.2-201ENST00000403318 432 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 BPY2DP-201ENST00000422208 265 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 SNAP23P1-201ENST00000433229 246 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 SETP5-201ENST00000437270 562 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC098831.1-201ENST00000440661 216 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 MTND1P17-201ENST00000448961 204 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 snoU13.28-201ENST00000459235 104 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 COPS8P3-201ENST00000526024 482 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AP005597.4-201ENST00000526762 229 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 AC245389.1-201ENST00000605141 529 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-85P-201ENST00000605989 107 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 ATP5A1P2-202ENST00000616464 443 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RMST_7.1-201ENST00000621935 268 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
TCRBV7S3A2A0A539 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 AC138393.1-203ENST00000327086 343 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNU4-73P-201ENST00000363164 141 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-214P-201ENST00000384130 107 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-658P-201ENST00000384606 106 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
TCRBV7S3A2A0A539 RPL7P37-201ENST00000425095 738 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms