Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RNA5SP505-201ENST00000364748 108 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RNU6-487P-201ENST00000365430 104 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 SNORA51.11-201ENST00000384442 131 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.551-201ENST00000384661 102 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC245028.1-201ENST00000423259 256 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RPS15AP5-201ENST00000436276 388 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AL731563.1-201ENST00000442202 214 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC073910.1-201ENST00000445047 438 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AL162151.2-201ENST00000448875 158 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC012308.1-201ENST00000451232 178 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RPS29P33-201ENST00000456717 146 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AP002884.2-201ENST00000471647 395 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC020593.1-201ENST00000507399 299 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RNU5F-8P-201ENST00000515941 111 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AP000827.1-201ENST00000527814 258 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AP001781.1-201ENST00000530977 207 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC006557.5-201ENST00000603126 811 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RPL23AP88-201ENST00000605759 454 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RN7SL722P-201ENST00000617780 284 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RN7SL565P-201ENST00000618246 284 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AL731566.2-201ENST00000618971 317 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 MIR4727-201ENST00000622232 55 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC007792.1-201ENST00000623023 402 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 AC010680.1-201ENST00000590024 3590 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.28□□□□□ -1.73
VTI1BQ9UEU0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 MIR3074-201ENST00000384885 81 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC023141.4-201ENST00000412031 328 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC114482.1-201ENST00000418010 247 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC245291.1-201ENST00000419501 328 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AL132765.1-201ENST00000434165 553 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 Z82188.1-201ENST00000436709 154 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 RPL21P2-201ENST00000440049 481 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AL353705.4-201ENST00000449661 238 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 HMGN2P7-201ENST00000456186 273 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 snoU13.30-201ENST00000458951 104 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AP001025.1-201ENST00000486139 332 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 RPL23AP75-201ENST00000491601 451 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 RN7SL812P-201ENST00000493791 279 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC016256.1-201ENST00000547971 354 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AL390123.1-201ENST00000603216 237 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC012531.5-201ENST00000611375 151 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 MIR6820-201ENST00000611508 62 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC006111.3-201ENST00000622137 383 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 AC008785.1-201ENST00000624475 456 ntBASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.27□□□□□ -1.73
VTI1BQ9UEU0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AC004944.1-201ENST00000517807 3059 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 Y_RNA.276-201ENST00000364732 109 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 RNU6-702P-201ENST00000364982 107 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 MIR544A-201ENST00000384855 91 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AP000907.1-201ENST00000428428 510 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 RN7SL738P-201ENST00000470264 297 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 RPL30P1-201ENST00000488676 339 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AC074250.1-201ENST00000511117 192 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 SNORD19.2-201ENST00000516978 73 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AC109329.1-201ENST00000518744 317 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 MIR4330-201ENST00000579077 105 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 RPS29P30-201ENST00000600975 111 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AC006006.1-201ENST00000603082 144 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 MIR6891-201ENST00000618788 93 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 AL136164.4-201ENST00000625013 2135 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 SNORA43.4-201ENST00000629559 138 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.26□□□□□ -1.73
VTI1BQ9UEU0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms