Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-611P-201ENST00000384276 104 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 BTF3L4P2-201ENST00000392798 346 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL359634.1-202ENST00000404721 284 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 RPL30P13-201ENST00000418873 348 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 MRPS36P1-201ENST00000421291 307 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL354941.1-201ENST00000438600 464 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL096829.2-201ENST00000446582 742 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC005908.1-201ENST00000468701 347 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC104629.1-201ENST00000494226 508 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC108210.2-201ENST00000503681 201 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AP003392.2-201ENST00000527269 208 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL133153.1-201ENST00000557756 303 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 SUB1P3-201ENST00000564581 315 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 CLIC4P2-201ENST00000601934 717 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC073410.2-201ENST00000603240 332 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.6-201ENST00000603753 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.11-201ENST00000604059 253 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AC008162.1-201ENST00000604718 254 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.1-201ENST00000604752 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.2-201ENST00000604983 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.5-201ENST00000605253 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.4-201ENST00000605279 254 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.12-201ENST00000605291 253 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.8-201ENST00000605353 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL670379.7-201ENST00000605823 252 ntBASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS29Q9UBQ0 RNU1-58P-201ENST00000362413 163 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 SNORD114-19-201ENST00000363072 75 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU6-1164P-201ENST00000364428 107 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU6-439P-201ENST00000384188 106 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU2-36P-201ENST00000410361 191 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU2-32P-201ENST00000411193 191 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 ELOCP30-201ENST00000447108 299 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 BTF3P15-201ENST00000455606 336 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 PTP4A1P4-201ENST00000512479 322 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 SNORA31.3-201ENST00000516029 96 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 RNU6-150P-201ENST00000516237 95 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AC104417.1-201ENST00000523974 751 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AC010900.2-201ENST00000604508 210 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 AL022345.1-201ENST00000607292 135 ntBASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS29Q9UBQ0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 TEX21P-201ENST00000447107 1476 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL022400.1-201ENST00000423946 935 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC112492.4-201ENST00000456549 352 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC026616.1-201ENST00000523157 525 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 MIR4422-201ENST00000581938 83 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC060771.1-201ENST00000582031 164 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC012467.1-201ENST00000607740 256 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC023158.2-201ENST00000614876 543 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL353997.5-201ENST00000618886 171 ntBASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS29Q9UBQ0 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU6-288P-201ENST00000363690 104 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU6-236P-201ENST00000363886 106 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 SNORA11.2-201ENST00000408318 127 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 PTENP1-201ENST00000447117 1215 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AL590365.1-201ENST00000450788 243 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
VPS29Q9UBQ0 RNU7-95P-201ENST00000459222 64 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms