Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.89
LRFN1Q9P244 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN1Q9P244 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 RNU1-33P-201ENST00000364249 162 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 RNU6-19P-201ENST00000384718 107 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 SNORA48.2-201ENST00000390926 124 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 EIF4E2P1-201ENST00000393781 255 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AL512633.1-201ENST00000399931 655 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 U3.39-201ENST00000408569 239 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 Y_RNA.615-201ENST00000410769 117 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 AL096701.2-201ENST00000416920 238 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC005019.1-201ENST00000436455 431 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 MTND3P10-201ENST00000450967 341 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC006026.2-201ENST00000457376 180 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC117503.1-201ENST00000472241 394 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 RPL31P41-201ENST00000477967 372 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 MRPS36P2-201ENST00000512569 299 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 SNORA20.3-201ENST00000516880 132 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN1Q9P244 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 RPL7P20-201ENST00000520308 745 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC060780.3-201ENST00000589464 80 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC024153.1-201ENST00000603103 365 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC099778.2-201ENST00000610904 211 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC011890.2-201ENST00000613393 294 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 AC005858.4-201ENST00000623191 700 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
LRFN1Q9P244 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN1Q9P244 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN1Q9P244 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN1Q9P244 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN1Q9P244 Y_RNA.100-201ENST00000363141 102 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 FTH1P15-201ENST00000406984 280 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC096664.2-201ENST00000411843 406 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC008155.2-201ENST00000464337 397 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 MRPL42P6-201ENST00000486397 371 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 SNORA19.2-201ENST00000516013 114 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN1Q9P244 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 MIR4298-201ENST00000584380 73 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC020895.1-201ENST00000595362 272 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AC008121.1-201ENST00000603244 268 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 AP000787.2-201ENST00000604432 568 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 RMST_8.1-201ENST00000610287 165 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
LRFN1Q9P244 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN1Q9P244 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.2□□□□□ -1.9
LRFN1Q9P244 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN1Q9P244 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRFN1Q9P244 Y_RNA.373-201ENST00000365600 103 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 USP9YP20-201ENST00000419224 558 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 RPL23AP58-201ENST00000440453 469 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 MTND5P20-201ENST00000448677 143 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
LRFN1Q9P244 RNU7-138P-201ENST00000459479 64 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC007547.1-201ENST00000462177 490 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AP000852.1-201ENST00000472460 573 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.19□□□□□ -1.9
LRFN1Q9P244 AC018710.1-201ENST00000506509 158 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 501 ms