Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 RPL21P17-201ENST00000397467 475 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC096920.1-201ENST00000423991 241 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 S100A11P1-201ENST00000477525 312 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC025465.3-201ENST00000510570 311 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 RNU7-175P-201ENST00000515915 61 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC010186.2-204ENST00000537668 439 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AL365434.2-201ENST00000607979 234 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 AC090617.7-201ENST00000623952 126 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 MAPK10-303ENST00000641324 3959 ntBASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ZFYVE28Q9HCC9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AC008568.2-201ENST00000623862 2313 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 SNORA12.2-201ENST00000391040 156 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 SNORA3.3-201ENST00000408712 125 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AL590664.1-201ENST00000448065 339 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 snoU109.2-201ENST00000459316 135 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 RPS29P27-201ENST00000463711 170 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 FTH1P9-201ENST00000513251 355 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.713-201ENST00000517013 96 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 TRAV28-201ENST00000557548 323 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AC104581.2-201ENST00000572227 430 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AC012433.1-201ENST00000588916 398 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AL138721.1-201ENST00000616756 179 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AC099506.2-201ENST00000623074 221 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AC027309.3-201ENST00000623419 351 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 U4.7-201ENST00000638126 106 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 AL672167.1-203ENST00000641299 2975 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 MAPK10-372ENST00000641954 3413 ntBASIC4.68□□□□□ -1.66
ZFYVE28Q9HCC9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.105-201ENST00000363182 111 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RNA5SP22-201ENST00000365393 109 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.405-201ENST00000383979 100 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.451-201ENST00000384200 100 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.458-201ENST00000384240 102 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.524-201ENST00000384564 100 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.561-201ENST00000384694 100 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 MIR183-201ENST00000384958 110 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 MIR634-201ENST00000385208 97 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RPS29P13-201ENST00000402041 169 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 MIR548H3-201ENST00000408771 118 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RNU2-25P-201ENST00000411041 191 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-130P-201ENST00000411112 103 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC098614.2-201ENST00000426040 255 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 SUMO1P3-201ENST00000439961 304 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC124916.1-201ENST00000444020 547 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC009237.8-201ENST00000445492 379 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RPL29P14-201ENST00000495837 428 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 HMGB3P17-201ENST00000504195 649 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.706-201ENST00000516933 99 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC025627.2-201ENST00000576220 160 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 AC092435.4-201ENST00000623012 4159 ntBASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ZFYVE28Q9HCC9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.123-201ENST00000363338 102 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-121P-201ENST00000410525 99 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RN7SKP177-201ENST00000410567 355 ntBASIC4.66□□□□□ -1.66
ZFYVE28Q9HCC9 RPS29P4-201ENST00000414733 161 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms