Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MAPK10-372ENST00000641954 3413 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 AC008264.2-201ENST00000610193 3731 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 SNORA63.2-201ENST00000362603 126 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 RNA5SP478-201ENST00000364657 115 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 Y_RNA.532-201ENST00000384590 113 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 AL356535.1-201ENST00000440335 398 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 AC079150.2-201ENST00000443733 78 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 AC095057.1-201ENST00000507583 168 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 RNU6-807P-201ENST00000516805 107 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 SNORA43.3-201ENST00000517240 103 ntBASIC8.64□□□□□ -1.03
SENP3Q9H4L4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SENP3Q9H4L4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 RNU6-519P-201ENST00000410590 108 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 RPS12P17-201ENST00000438591 377 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 DCLRE1CP1-201ENST00000454630 470 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 RN7SL72P-201ENST00000460697 269 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 IMMP1LP3-201ENST00000604197 224 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 AC013412.1-201ENST00000610687 192 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 MIR378J-201ENST00000611988 109 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 AC074140.1-201ENST00000621617 208 ntBASIC8.63□□□□□ -1.03
SENP3Q9H4L4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SENP3Q9H4L4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 AC005332.5-201ENST00000591222 2919 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 MIR433-201ENST00000384837 93 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 Y_RNA.596-201ENST00000410462 109 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 AC006463.2-201ENST00000473326 348 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 IGLVIV-65-201ENST00000517313 360 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 MIR4697-201ENST00000582977 78 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 AC138965.3-201ENST00000623875 498 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 MIR3199-2-201ENST00000636243 86 ntBASIC8.62□□□□□ -1.03
SENP3Q9H4L4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SENP3Q9H4L4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC007496.3-201ENST00000624987 3443 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC010680.1-201ENST00000590024 3590 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 SELENOWP1-201ENST00000322792 252 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 RNU6-161P-201ENST00000363051 106 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 MIR1286-201ENST00000408112 78 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 MIR1183-201ENST00000408856 89 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AL139148.1-201ENST00000427122 680 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 RNU6-948P-201ENST00000516374 107 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 RNU4-60P-201ENST00000517239 135 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 AP005019.3-201ENST00000620418 560 ntBASIC8.61□□□□□ -1.03
SENP3Q9H4L4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SENP3Q9H4L4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 MAPK10-287ENST00000641217 3037 ntBASIC8.6□□□□□ -1.03
SENP3Q9H4L4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 MIR633-201ENST00000384821 98 ntBASIC8.6□□□□□ -1.03
SENP3Q9H4L4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 RPL23AP27-201ENST00000415161 451 ntBASIC8.6□□□□□ -1.03
SENP3Q9H4L4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 AL663074.2-201ENST00000440621 479 ntBASIC8.6□□□□□ -1.03
SENP3Q9H4L4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.6□□□□□ -1.03
SENP3Q9H4L4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms