Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
VPS11Q9H270 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS11Q9H270 Y_RNA.19-201ENST00000362462 99 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU6-212P-201ENST00000362642 104 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNA5SP295-201ENST00000362655 121 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU1-32P-201ENST00000363937 159 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 SNORD27-201ENST00000363981 72 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS11Q9H270 Y_RNA.416-201ENST00000384014 113 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU6-662P-201ENST00000384253 104 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU2-33P-201ENST00000410344 192 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AC009220.1-201ENST00000451614 275 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 PCMTD1P1-201ENST00000455560 355 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU7-187P-201ENST00000458985 68 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AC105137.1-201ENST00000484355 562 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AC026801.1-201ENST00000497178 464 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS11Q9H270 RNU6-397P-201ENST00000516226 104 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 RN7SKP83-201ENST00000516512 178 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 AC005899.2-201ENST00000584353 90 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS11Q9H270 U7.8-201ENST00000619968 63 ntBASIC3.9□□□□□ -1.79
VPS11Q9H270 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS11Q9H270 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS11Q9H270 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS11Q9H270 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS11Q9H270 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS11Q9H270 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS11Q9H270 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
VPS11Q9H270 Y_RNA.29-201ENST00000362570 113 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 RNU6-280P-201ENST00000364145 104 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 Y_RNA.270-201ENST00000364693 104 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
VPS11Q9H270 RNU6-741P-201ENST00000383889 107 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 RNU6-701P-201ENST00000384059 107 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 MIR141-201ENST00000384975 95 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS11Q9H270 RNU6-121P-201ENST00000410525 99 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS11Q9H270 TMEM167AP1-201ENST00000423409 219 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC091390.3-201ENST00000426478 338 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC097713.2-201ENST00000430199 356 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 RPL23AP69-201ENST00000431134 458 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AL133396.1-201ENST00000432048 687 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS11Q9H270 AL139109.1-201ENST00000455491 297 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AL136097.1-201ENST00000456945 913 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AL049830.2-201ENST00000480072 201 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AL132838.2-201ENST00000492041 314 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC093852.1-201ENST00000503587 266 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC096745.1-201ENST00000509945 370 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 SNORA31.3-201ENST00000516029 96 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 RNU5B-3P-201ENST00000516601 115 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 Y_RNA.703-201ENST00000516846 111 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 RN7SKP209-201ENST00000516888 304 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS11Q9H270 AP006587.4-201ENST00000526053 529 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 ATP5F1P5-201ENST00000526403 760 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS11Q9H270 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS11Q9H270 AC127459.3-201ENST00000624328 466 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 AC132825.6-201ENST00000638861 357 ntBASIC3.89□□□□□ -1.79
VPS11Q9H270 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS11Q9H270 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS11Q9H270 Y_RNA.551-201ENST00000384661 102 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNU6-387P-201ENST00000411331 105 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 Z85995.1-201ENST00000415547 335 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RPL21P38-201ENST00000418090 167 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS11Q9H270 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RPS3AP12-201ENST00000443616 753 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS11Q9H270 LINC01399-202ENST00000458450 244 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNA5SP310-201ENST00000459084 116 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AC087588.1-201ENST00000462203 316 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS11Q9H270 TRBVB-201ENST00000477100 408 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 TRBV12-2-201ENST00000489763 344 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNU6-307P-201ENST00000516743 106 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNU6-352P-201ENST00000516908 107 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNU6-1212P-201ENST00000517023 104 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNU6-897P-201ENST00000517135 105 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNA5SP179-201ENST00000517284 121 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms