Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AC005183.1-201ENST00000603687 1979 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RNA5SP124-201ENST00000362739 110 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RNU6-596P-201ENST00000365395 98 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RNU6-1062P-201ENST00000383908 107 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.534-201ENST00000384599 112 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 PTMAP2-201ENST00000397627 327 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RAB9AP3-201ENST00000412737 573 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 GOT2P5-201ENST00000433995 546 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RAB9AP1-201ENST00000449393 573 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 HMGN2P16-201ENST00000456802 261 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 RNU6-897P-201ENST00000517135 105 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 CYCSP30-201ENST00000546447 172 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 SDR42E1P4-201ENST00000620894 481 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 AC130454.1-201ENST00000622948 401 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 CR392039.5-201ENST00000623201 510 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF38Q9H0F5 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
RNF38Q9H0F5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF38Q9H0F5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF38Q9H0F5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 Y_RNA.117-201ENST00000363294 101 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU4-50P-201ENST00000364361 141 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 MIR628-201ENST00000385229 95 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 MIR493-201ENST00000385254 89 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNA5SP171-201ENST00000391071 115 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AL513475.1-201ENST00000406602 315 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 SNORA3.3-201ENST00000408712 125 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 U3.42-201ENST00000408746 214 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RN7SKP156-201ENST00000410308 342 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AL590383.1-201ENST00000428602 75 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RPS15AP34-201ENST00000487776 387 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 GZMAP1-201ENST00000503054 631 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU6-138P-201ENST00000515952 107 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU1-86P-201ENST00000516108 154 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU6-927P-201ENST00000516199 100 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 RNU1-107P-201ENST00000516617 154 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 IGKV2-38-201ENST00000517443 247 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AMZ2P1-203ENST00000565833 850 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AL390123.1-201ENST00000603216 237 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 MIR92B-201ENST00000607575 96 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 AL159153.1-201ENST00000619688 317 ntBASIC4.08□□□□□ -1.76
RNF38Q9H0F5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF38Q9H0F5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RNU6-1317P-201ENST00000364582 104 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 Y_RNA.526-201ENST00000384572 110 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 Y_RNA.562-201ENST00000384695 113 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 U8.11-201ENST00000384699 133 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 U8.12-201ENST00000384701 133 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RNU6-1093P-201ENST00000391194 107 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 SNORA3C-201ENST00000408792 125 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RPL21P38-201ENST00000418090 167 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC083863.1-201ENST00000438811 231 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AL590664.1-201ENST00000448065 339 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 U8.18-201ENST00000459285 133 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC025465.3-201ENST00000510570 311 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RNA5SP471-201ENST00000516971 106 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RNU6-111P-201ENST00000517179 105 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC144568.1-201ENST00000520139 137 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AP003733.2-201ENST00000529409 171 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC004024.1-201ENST00000549244 247 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC012433.1-201ENST00000588916 398 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 RPS29P30-201ENST00000600975 111 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC073410.2-201ENST00000603240 332 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AC090132.2-201ENST00000615881 347 ntBASIC4.07□□□□□ -1.76
RNF38Q9H0F5 AL773545.4-201ENST00000637262 310 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms