Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AMBRA1Q9C0C7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
AMBRA1Q9C0C7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.5-201ENST00000362334 102 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-37P-201ENST00000362692 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-11P-201ENST00000364234 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-7-201ENST00000364784 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-8-201ENST00000365467 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-25P-201ENST00000383873 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1-201ENST00000383898 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-639P-201ENST00000384074 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-48P-201ENST00000384161 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-36P-201ENST00000384172 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-4P-201ENST00000384205 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-5P-201ENST00000384238 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-3P-201ENST00000384314 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-16P-201ENST00000384385 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-15P-201ENST00000384534 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-2-201ENST00000384627 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-29P-201ENST00000384637 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-331P-201ENST00000384724 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-9-201ENST00000384776 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-33P-201ENST00000384793 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 MIR517A-201ENST00000385001 87 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AL030996.1-201ENST00000411430 235 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 Z92545.1-201ENST00000411782 234 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 PGBD4P6-201ENST00000421501 610 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC018865.2-201ENST00000423631 129 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AL035666.1-201ENST00000446195 348 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 FTH1P25-201ENST00000447665 469 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 HMGB3P8-201ENST00000449709 577 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AL583843.1-201ENST00000456070 346 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC008571.1-201ENST00000467232 300 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC018437.1-201ENST00000492214 406 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 HMGN1P11-201ENST00000508668 303 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC123912.5-201ENST00000605470 343 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-6P-201ENST00000606623 107 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC011890.2-201ENST00000613393 294 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC099506.2-201ENST00000623074 221 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC048347.1-201ENST00000624621 427 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 AC066616.2-201ENST00000559334 1481 ntBASIC3.4□□□□□ -1.87
AMBRA1Q9C0C7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 MTND5P1-201ENST00000445440 1375 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 MTND5P30-201ENST00000452896 1731 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 MIR325-201ENST00000385260 98 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SNORA40C-201ENST00000391285 128 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SNORA3.3-201ENST00000408712 125 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 USMG5P1-201ENST00000425964 177 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SNRPEP9-201ENST00000436794 238 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 ANP32BP2-201ENST00000454525 545 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SNORA59A-201ENST00000459326 152 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 RN7SL323P-201ENST00000494712 295 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 RPL30P5-201ENST00000494923 336 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 SNORA31.19-201ENST00000517079 126 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC026403.1-201ENST00000518938 295 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC087499.8-201ENST00000578406 226 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC005899.2-201ENST00000584353 90 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AP000787.2-201ENST00000604432 568 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC007938.3-201ENST00000604965 623 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms