Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.24□□□□□ -1.73
CITED4Q96RK1 AC009779.6-201ENST00000603972 165 ntBASIC4.24□□□□□ -1.73
CITED4Q96RK1 AC010999.1-201ENST00000611856 324 ntBASIC4.24□□□□□ -1.73
CITED4Q96RK1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.24□□□□□ -1.73
CITED4Q96RK1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.24□□□□□ -1.73
CITED4Q96RK1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CITED4Q96RK1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CITED4Q96RK1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.24□□□□□ -1.73
CITED4Q96RK1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC007256.1-201ENST00000392253 2765 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 Y_RNA.117-201ENST00000363294 101 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 RNU6-1145P-201ENST00000384246 107 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 RNU6-748P-201ENST00000384648 107 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 MIR208B-201ENST00000401172 77 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC245291.1-201ENST00000419501 328 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 SNORA71B-202ENST00000439232 272 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 HMGB1P37-201ENST00000439613 609 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC011276.1-201ENST00000469688 323 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC117440.1-201ENST00000474107 571 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 RN7SL826P-201ENST00000479724 288 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 SNORA40.9-201ENST00000515895 93 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 RNU5B-3P-201ENST00000516601 115 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 SNORD19.2-201ENST00000516978 73 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC023043.4-201ENST00000612081 449 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC090607.5-201ENST00000615692 224 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AL138880.2-201ENST00000616214 239 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC010889.1-201ENST00000566193 2666 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC010733.2-201ENST00000589496 5702 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
CITED4Q96RK1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 AC135776.4-201ENST00000624300 1904 ntBASIC4.23□□□□□ -1.73
CITED4Q96RK1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CITED4Q96RK1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CITED4Q96RK1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CITED4Q96RK1 LINC02471-203ENST00000641941 4752 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 RNU5F-3P-201ENST00000363767 117 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 SNORD115-8-201ENST00000363856 82 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 Y_RNA.286-201ENST00000364813 102 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 SNORD115-38-201ENST00000365037 82 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 RNU4-70P-201ENST00000384579 139 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 MIR93-201ENST00000385024 80 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 MIR223-201ENST00000385204 110 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 U3.22-201ENST00000391120 215 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 PTMAP5-201ENST00000393073 333 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 RN7SKP216-201ENST00000411050 312 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 OR4C10P-201ENST00000434991 931 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 SETP5-201ENST00000437270 562 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC073901.1-201ENST00000462471 408 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 RN7SL583P-201ENST00000475692 287 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 RN7SL570P-201ENST00000484405 292 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 TRAV8-5-201ENST00000537369 341 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC130289.1-201ENST00000577321 73 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC006116.3-201ENST00000592968 361 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC010201.1-201ENST00000605051 540 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC109583.2-201ENST00000617367 129 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 MIR7154-201ENST00000620673 73 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 AC006001.4-201ENST00000622243 395 ntBASIC4.22□□□□□ -1.73
CITED4Q96RK1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CITED4Q96RK1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CITED4Q96RK1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CITED4Q96RK1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CITED4Q96RK1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.21□□□□□ -1.73
CITED4Q96RK1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CITED4Q96RK1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CITED4Q96RK1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CITED4Q96RK1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CITED4Q96RK1 AC002546.1-201ENST00000588041 2504 ntBASIC4.21□□□□□ -1.74
CITED4Q96RK1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CITED4Q96RK1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.21□□□□□ -1.74
CITED4Q96RK1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CITED4Q96RK1 RNU1-83P-201ENST00000363426 164 ntBASIC4.21□□□□□ -1.74
CITED4Q96RK1 RNA5SP507-201ENST00000363603 121 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms