Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AP002963.1-201ENST00000530590 184 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AL391840.1-201ENST00000571144 367 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AC068790.2-201ENST00000602601 557 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AC026422.1-201ENST00000623961 452 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 AC009161.2-201ENST00000624626 138 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.59□□□□□ -1.99
RAB3IPQ96QF0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RAB3IPQ96QF0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -2
RAB3IPQ96QF0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
RAB3IPQ96QF0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 Y_RNA.77-201ENST00000362962 107 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 RNU4-48P-201ENST00000365559 182 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 MTCO2P34-201ENST00000421994 607 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 RPS3AP44-201ENST00000425466 790 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 RNU6-1178P-201ENST00000516674 107 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 FAM92A1P1-201ENST00000528023 890 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 CBX3P7-201ENST00000532876 502 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 PRELID2P1-201ENST00000552837 301 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC006362.1-201ENST00000567392 174 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 RPS15AP11-201ENST00000594193 385 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC093788.1-201ENST00000609356 927 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC096577.2-201ENST00000611455 153 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 AC005332.10-201ENST00000612725 619 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 MIR3529-201ENST00000637713 78 ntBASIC2.58□□□□□ -2
RAB3IPQ96QF0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB3IPQ96QF0 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 SNORA54-201ENST00000384281 123 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 SNORD116-20-201ENST00000384529 92 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 UBE2V1P10-201ENST00000414685 269 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 RPLP0P7-201ENST00000416050 667 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 MTCO2P11-201ENST00000431069 680 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AL596276.1-201ENST00000434465 418 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB3IPQ96QF0 CACYBPP2-201ENST00000453625 678 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC022364.2-201ENST00000457963 554 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC133134.1-201ENST00000466800 359 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 RPL7P43-201ENST00000478876 753 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC018437.1-201ENST00000492214 406 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 MTCO2P4-201ENST00000517968 247 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AL356057.1-201ENST00000533798 831 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 RSL24D1P11-201ENST00000591045 491 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 RPL12P50-201ENST00000603116 116 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 RNU6-91P-201ENST00000607774 107 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AP001486.3-201ENST00000615334 372 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC026585.1-201ENST00000619582 524 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 SCARNA4-202ENST00000625402 129 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC090582.1-201ENST00000636321 199 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AC073346.2-201ENST00000624724 2058 ntBASIC2.57□□□□□ -2
RAB3IPQ96QF0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
RAB3IPQ96QF0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAB3IPQ96QF0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
RAB3IPQ96QF0 OR56A5-201ENST00000340110 738 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 SNORD114-19-201ENST00000363072 75 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 RNU6-715P-201ENST00000365204 103 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 RNU6-45P-201ENST00000384471 107 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AF274854.1-201ENST00000413236 615 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 MTND1P18-201ENST00000448191 573 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC132479.1-201ENST00000449160 144 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 RPL31P3-201ENST00000458430 332 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 CKS1BP2-201ENST00000497342 240 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AP002404.1-201ENST00000532005 451 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC025449.1-201ENST00000603896 529 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms