Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RNA5SP197-201ENST00000363357 119 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RNU6-82P-201ENST00000363970 107 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RNU4-66P-201ENST00000365199 138 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RNU5E-7P-201ENST00000365290 117 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.402-201ENST00000383972 102 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 SNORD116-20-201ENST00000384529 92 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 OR9R1P-201ENST00000412200 877 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 SUMO1P4-201ENST00000429430 302 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 HMGB1P31-201ENST00000437242 427 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AL121601.2-201ENST00000438019 707 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC012308.1-201ENST00000451232 178 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MTND3P16-201ENST00000452205 344 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 DYNLL1P5-201ENST00000467158 270 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RPL7P43-201ENST00000478876 753 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RPL36AP48-201ENST00000485521 314 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 RN7SKP18-201ENST00000516005 275 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC090115.3-201ENST00000553218 849 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MIR3616-201ENST00000584070 92 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC002044.1-201ENST00000606707 158 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AL157817.1-201ENST00000614264 790 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 FER-210ENST00000628534 558 ntTSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 MIR7157-201ENST00000635801 60 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC068137.3-201ENST00000639191 341 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 AC080128.1-201ENST00000474389 1917 ntBASIC2.77□□□□□ -1.97
CMTM3Q96MX0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNU6-78P-201ENST00000362897 107 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNY4P14-201ENST00000363656 96 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNU6-266P-201ENST00000364225 107 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNU6-192P-201ENST00000391253 100 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNU6-1068P-201ENST00000410958 103 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AF274854.1-201ENST00000413236 615 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AL096701.2-201ENST00000416920 238 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 MTCO1P20-201ENST00000425366 358 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 ATP5JP1-201ENST00000431631 322 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RPL22P13-201ENST00000493291 347 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 RNA5SP112-201ENST00000515937 99 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 SCARNA3-201ENST00000517097 143 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 CENPUP1-201ENST00000526649 1202 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 CYCSP27-201ENST00000527643 293 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC109635.3-201ENST00000529536 185 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 MIR4446-201ENST00000578505 67 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC012493.2-201ENST00000595083 291 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AL021997.1-201ENST00000605757 193 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 DISC2.1-201ENST00000612827 205 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.76□□□□□ -1.97
CMTM3Q96MX0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.76□□□□□ -1.97
CMTM3Q96MX0 MTND4P27-201ENST00000450813 1354 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RBBP8P1-201ENST00000449447 1844 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-37P-201ENST00000362692 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-486P-201ENST00000363116 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-11P-201ENST00000364234 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-7-201ENST00000364784 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-487P-201ENST00000365430 104 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-8-201ENST00000365467 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU4-20P-201ENST00000365601 151 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-25P-201ENST00000383873 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-1-201ENST00000383898 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-48P-201ENST00000384161 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-36P-201ENST00000384172 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-4P-201ENST00000384205 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-5P-201ENST00000384238 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-3P-201ENST00000384314 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-16P-201ENST00000384385 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-15P-201ENST00000384534 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms