Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.93□□□□□ -1.62
VTI1AQ96AJ9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTI1AQ96AJ9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTI1AQ96AJ9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VTI1AQ96AJ9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTI1AQ96AJ9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AL359693.1-201ENST00000614959 2407 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 RNU2-68P-201ENST00000410878 191 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 PIGPP3-201ENST00000425307 415 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC098614.2-201ENST00000426040 255 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AL513124.1-201ENST00000450410 614 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AL132838.2-201ENST00000492041 314 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 TRAV8-5-201ENST00000537369 341 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 TRAV28-201ENST00000557548 323 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 MIR4286-201ENST00000580651 93 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 RPL23AP78-201ENST00000599928 470 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC136601.2-201ENST00000604356 474 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 MIR376A1-201ENST00000616574 68 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AC048347.1-201ENST00000624621 427 ntBASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VTI1AQ96AJ9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RNA5SP22-201ENST00000365393 109 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 Y_RNA.439-201ENST00000384119 94 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RNU6-72P-201ENST00000384285 79 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RNY3P4-201ENST00000384428 101 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 PPIAP31-201ENST00000405422 495 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AL603910.2-201ENST00000407268 136 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 Z82188.1-201ENST00000436709 154 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AL162151.2-201ENST00000448875 158 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RNU5B-3P-201ENST00000516601 115 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 RNA5SP468-201ENST00000516782 93 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AC091144.1-201ENST00000519573 138 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AC093023.1-201ENST00000547375 507 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 MIR3158-1-201ENST00000583596 81 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 AL450472.1-202ENST00000637286 180 ntBASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VTI1AQ96AJ9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.9□□□□□ -1.62
VTI1AQ96AJ9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VTI1AQ96AJ9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VTI1AQ96AJ9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
VTI1AQ96AJ9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
VTI1AQ96AJ9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP513-201ENST00000364648 118 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNU1-44P-201ENST00000384453 163 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP171-201ENST00000391071 115 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 BX679664.1-201ENST00000434429 253 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 TOMM22P6-201ENST00000465035 409 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RN7SL542P-201ENST00000467147 294 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNU7-175P-201ENST00000515915 61 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP49-201ENST00000516450 115 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 SNORA67.7-201ENST00000516664 135 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 Y_RNA.706-201ENST00000516933 99 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNU6-182P-201ENST00000516970 105 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 SNORA31.18-201ENST00000517043 134 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 RNA5SP291-201ENST00000517222 105 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 ZNF192P1-203ENST00000565888 810 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 AC079587.1-201ENST00000603846 277 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 MIR6867-201ENST00000610636 67 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 AC137590.2-201ENST00000619709 240 ntBASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
VTI1AQ96AJ9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTI1AQ96AJ9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VTI1AQ96AJ9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms