Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR1273C-201ENST00000578669 77 ntBASIC4.4□□□□□ -1.71
SHKBP1Q8TBC3 MIR4308-201ENST00000580634 81 ntBASIC4.4□□□□□ -1.71
SHKBP1Q8TBC3 MIR4286-201ENST00000580651 93 ntBASIC4.4□□□□□ -1.71
SHKBP1Q8TBC3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.4□□□□□ -1.71
SHKBP1Q8TBC3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.71
SHKBP1Q8TBC3 AL592182.3-201ENST00000642132 3304 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.569-201ENST00000384749 103 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 SNORD66.1-201ENST00000391230 76 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-603P-201ENST00000411403 107 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 MTCO1P39-201ENST00000426148 480 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RPL21P40-201ENST00000428586 483 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AL162725.1-201ENST00000435405 301 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 HSPD1P21-201ENST00000436541 245 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RN7SL542P-201ENST00000467147 294 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RPS26P28-201ENST00000470806 348 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC010683.1-201ENST00000473673 378 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 RN7SL604P-201ENST00000492589 296 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC008489.1-201ENST00000524271 483 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC069240.1-201ENST00000548774 375 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AL157871.3-201ENST00000557231 293 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC053481.4-201ENST00000583164 216 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 AC116447.1-201ENST00000613153 453 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 ZNF962P-201ENST00000443465 3140 ntBASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHKBP1Q8TBC3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 UBE2WP1-201ENST00000362030 340 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 SNORA25.1-201ENST00000362326 128 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.272-201ENST00000364696 102 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.586-201ENST00000391146 98 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 RPL23AP45-201ENST00000476406 468 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 RN7SL132P-201ENST00000478131 296 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 RPS29P19-201ENST00000479709 171 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AC104164.2-201ENST00000496953 495 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AC023632.4-201ENST00000517783 191 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AC022655.2-201ENST00000577280 318 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 SRGNP1-201ENST00000603392 451 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 MIR7151-201ENST00000617477 60 ntBASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHKBP1Q8TBC3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 UBE2L2-201ENST00000254302 429 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-395P-201ENST00000365662 106 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RNU4-30P-201ENST00000410245 143 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RN7SKP202-201ENST00000410439 330 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RPL7AP73-201ENST00000413490 353 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 AL592148.1-201ENST00000413568 445 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RPL23AP46-201ENST00000438548 490 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 RPS29P7-201ENST00000439662 171 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 SNORD2.1-201ENST00000458762 69 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 MIR4429-201ENST00000580105 73 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 MIR92B-201ENST00000607575 96 ntBASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHKBP1Q8TBC3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms