Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC087241.4-201ENST00000612441 480 ntBASIC2.29□□□□□ -2.04
BEST4Q8NFU0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.29□□□□□ -2.04
BEST4Q8NFU0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.29□□□□□ -2.04
BEST4Q8NFU0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
BEST4Q8NFU0 AL359693.1-201ENST00000614959 2407 ntBASIC2.29□□□□□ -2.04
BEST4Q8NFU0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BEST4Q8NFU0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC027514.1-201ENST00000588561 1603 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RNU6-858P-201ENST00000362436 107 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 Y_RNA.38-201ENST00000362617 102 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RNU6-1085P-201ENST00000363576 107 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 SNORD14B-201ENST00000364533 90 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RNA5SP267-201ENST00000364893 126 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RNU4-20P-201ENST00000365601 151 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 MIR449B-201ENST00000384995 97 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 MIR518D-201ENST00000385014 87 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 SNORA48.5-201ENST00000391143 135 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 NDUFS5P4-201ENST00000412983 318 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AF274854.1-201ENST00000413236 615 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 MTCYBP5-201ENST00000423752 1135 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AL161651.1-201ENST00000440882 223 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 BRK1P2-201ENST00000442875 223 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC133134.1-201ENST00000466800 359 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 RPL23AP70-201ENST00000483361 460 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 SNORA74D-201ENST00000516404 141 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 Y_RNA.687-201ENST00000516558 91 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 BTF3P12-201ENST00000519620 469 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 GLYCAM1-201ENST00000546596 285 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AL118558.2-201ENST00000556294 238 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC090616.3-201ENST00000582184 217 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AL020997.2-201ENST00000602607 184 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC024153.1-201ENST00000603103 365 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AP003400.5-201ENST00000624827 617 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 MIR7515-201ENST00000637837 67 ntBASIC2.28□□□□□ -2.04
BEST4Q8NFU0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.28□□□□□ -2.04
BEST4Q8NFU0 AC026241.1-201ENST00000517873 2142 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RNU1-105P-201ENST00000363470 161 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RNU4-12P-201ENST00000365233 139 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 SNORD115-47-201ENST00000391226 86 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RPL17P50-201ENST00000396131 546 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 FTH1P15-201ENST00000406984 280 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 CYCSP33-201ENST00000414485 327 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL121601.2-201ENST00000438019 707 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 MTATP6P7-201ENST00000453315 681 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 BTF3P15-201ENST00000455606 336 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 SNRPFP3-201ENST00000457792 225 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC087884.1-201ENST00000469738 328 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RN7SL807P-201ENST00000470923 297 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC092989.1-201ENST00000481235 277 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL163973.1-201ENST00000484753 577 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 SNORA40.12-201ENST00000516329 111 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 SUB1P1-201ENST00000524415 382 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 LINC00933-203ENST00000559812 219 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 TPRKBP2-201ENST00000565969 475 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC010620.2-201ENST00000600135 313 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC123912.5-201ENST00000605470 343 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC002044.1-201ENST00000606707 158 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC017083.3-201ENST00000609955 700 ntBASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
BEST4Q8NFU0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms