Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL365204.3-201ENST00000612448 685 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC027335.2-201ENST00000624030 375 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 MIR6086-201ENST00000638065 55 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 MIR10B-201ENST00000385011 110 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 TAF9BP2-201ENST00000400856 499 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 SSXP10-201ENST00000402595 565 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC006461.1-201ENST00000412637 326 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 UBE2V1P4-201ENST00000425374 344 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 ZNF863P-201ENST00000426746 417 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 RPL26P9-201ENST00000457466 433 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 SNORD19.2-201ENST00000516978 73 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC093510.2-201ENST00000562820 896 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AC073544.2-201ENST00000601155 540 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 AP000403.1-201ENST00000603349 851 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 uc_338.14-201ENST00000613162 166 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 MIR5739-201ENST00000619803 80 ntBASIC0.41□□□□□ -2.34
UBR3Q6ZT12 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.41□□□□□ -2.34
UBR3Q6ZT12 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 RNU6-271P-201ENST00000363858 105 ntBASIC0.4□□□□□ -2.35
UBR3Q6ZT12 Y_RNA.471-201ENST00000384312 102 ntBASIC0.4□□□□□ -2.35
UBR3Q6ZT12 MIR561-201ENST00000385216 97 ntBASIC0.4□□□□□ -2.35
UBR3Q6ZT12 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
UBR3Q6ZT12 SNORA48.9-201ENST00000516419 162 ntBASIC0.4□□□□□ -2.35
UBR3Q6ZT12 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.4□□□□□ -2.35
UBR3Q6ZT12 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RNU6-968P-201ENST00000384076 107 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RNU6-452P-201ENST00000384406 107 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 MIR506-201ENST00000384998 124 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RNU2-63P-201ENST00000410792 194 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC096649.2-201ENST00000416186 393 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL160275.3-201ENST00000423876 471 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 CENPUP1-201ENST00000526649 1202 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL139344.1-201ENST00000605228 195 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC024581.2-201ENST00000619986 252 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RNU6-31P-201ENST00000384388 108 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC092634.2-201ENST00000428146 1010 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL161788.1-201ENST00000441805 169 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RAC1P7-201ENST00000445367 377 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 DDX3P2-201ENST00000446138 111 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC087477.1-201ENST00000465747 340 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC091435.1-201ENST00000505442 584 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AP003122.4-201ENST00000530980 758 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL590705.4-201ENST00000532209 134 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 EIF4A1P12-201ENST00000551910 141 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AL049870.4-201ENST00000555741 486 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
UBR3Q6ZT12 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
UBR3Q6ZT12 RNU2-49P-201ENST00000410666 184 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AC069282.1-201ENST00000411911 526 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AC019070.1-201ENST00000415008 1024 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AL035410.1-201ENST00000427409 427 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 FABP5P14-201ENST00000437273 393 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 MTCO1P53-201ENST00000441633 699 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AC114982.1-201ENST00000469402 321 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 RAP1BP2-201ENST00000478270 544 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 ACA64.5-201ENST00000516207 127 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AC136628.3-201ENST00000521868 290 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.38□□□□□ -2.35
UBR3Q6ZT12 FTX_3.1-201ENST00000610451 147 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 AC007792.1-201ENST00000623023 402 ntBASIC0.38□□□□□ -2.35
UBR3Q6ZT12 RNU6-288P-201ENST00000363690 104 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AL031577.2-201ENST00000404133 280 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 LINC01347-201ENST00000417964 355 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 MED14P1-201ENST00000430517 648 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC104073.1-201ENST00000451988 151 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 GTF2IP12-201ENST00000456547 356 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 FCF1P6-201ENST00000456841 595 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC067904.2-201ENST00000517322 1283 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AL391813.1-201ENST00000603098 260 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms