Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 AC008745.1-201ENST00000604064 271 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AL591926.8-201ENST00000616876 211 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 MIR6133-201ENST00000617057 108 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 MIR548AY-201ENST00000617669 107 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AC091905.4-201ENST00000623432 202 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 INTS6P1-201ENST00000504674 2530 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 RNU6-1249P-201ENST00000363237 111 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 RNU6-1141P-201ENST00000364520 107 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 SNORA18.3-201ENST00000384122 132 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 MIR514A1-201ENST00000385133 98 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 MIR589-201ENST00000385238 99 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 RPL21P3-201ENST00000395517 478 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 MIR891A-201ENST00000401237 79 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 SNORA36B-201ENST00000410438 131 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC119751.6-201ENST00000416712 186 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 MTATP6P21-201ENST00000440681 189 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC011753.3-201ENST00000443436 406 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AL500522.2-201ENST00000448562 343 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 SNRPGP7-201ENST00000469016 106 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 RN7SL817P-201ENST00000480777 288 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC008897.1-201ENST00000494006 347 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 RNU2-13P-201ENST00000515909 113 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 RNU6-107P-201ENST00000516643 102 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 TOMM20P2-201ENST00000540082 421 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 MIR4666B-201ENST00000578142 81 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC025946.2-201ENST00000603398 234 ntBASIC5.5□□□□□ -1.53
VARS2Q5ST30 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VARS2Q5ST30 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.5□□□□□ -1.53
VARS2Q5ST30 AL133383.2-201ENST00000622958 2336 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 FAM91A3P-201ENST00000456826 2544 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 RNVU1-6-201ENST00000364688 164 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 RNU6-1240P-201ENST00000365155 104 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 Y_RNA.415-201ENST00000384012 112 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 RN7SKP101-201ENST00000411376 320 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 Z85995.1-201ENST00000415547 335 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC012306.1-201ENST00000423267 114 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 HMGB1P37-201ENST00000439613 609 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC007969.2-201ENST00000441891 191 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 RPL34P20-201ENST00000442771 351 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 TDGF1P1-201ENST00000445734 527 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 RPL31P41-201ENST00000477967 372 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 RNU6-365P-201ENST00000517113 106 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 RNA5SP290-201ENST00000517133 127 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC021006.3-201ENST00000530771 192 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC141557.1-201ENST00000540982 400 ntBASIC5.49□□□□□ -1.53
VARS2Q5ST30 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VARS2Q5ST30 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VARS2Q5ST30 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VARS2Q5ST30 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 Y_RNA.313-201ENST00000365095 103 ntBASIC5.48□□□□□ -1.53
VARS2Q5ST30 SNORA5.1-201ENST00000384275 131 ntBASIC5.48□□□□□ -1.53
VARS2Q5ST30 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.48□□□□□ -1.53
VARS2Q5ST30 RNU7-115P-201ENST00000516433 55 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms