Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU1-103P-201ENST00000516502 125 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AC010653.1-201ENST00000571108 881 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 MIR4719-201ENST00000585233 84 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AC243960.4-201ENST00000600532 288 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AL160281.1-201ENST00000605307 311 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.75□□□□□ -1.81
LONRF3Q496Y0 AL132765.2-201ENST00000610812 351 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 uc_338.5-201ENST00000611839 155 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 DUSP12P1-201ENST00000612874 516 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 MIR7112-201ENST00000616126 65 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 UCA1.1-201ENST00000620952 75 ntBASIC3.75□□□□□ -1.81
LONRF3Q496Y0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LONRF3Q496Y0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LONRF3Q496Y0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.75□□□□□ -1.81
LONRF3Q496Y0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 RNU6-82P-201ENST00000363970 107 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 MIR128-1-201ENST00000384921 82 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC009296.1-201ENST00000443146 155 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 RPS27P29-201ENST00000463110 252 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 RPL27AP5-201ENST00000469428 449 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC139453.3-201ENST00000493276 369 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 SEM1P1-201ENST00000506694 209 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC105029.1-201ENST00000520250 669 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 TRAV37-201ENST00000553906 342 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 OR11H5P-201ENST00000554039 926 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 H3F3AP1-201ENST00000559984 334 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC106782.4-201ENST00000568264 210 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 BNIP3P25-201ENST00000596023 559 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AC019159.1-201ENST00000605094 187 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 AP003400.5-201ENST00000624827 617 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 TPTEP1-208ENST00000636884 213 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 U6.99-201ENST00000637524 83 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LONRF3Q496Y0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.74□□□□□ -1.81
LONRF3Q496Y0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 RNU1-73P-201ENST00000383971 164 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 MIR301A-201ENST00000385261 86 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 SNORD70.1-201ENST00000391007 85 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 Z92545.1-201ENST00000411782 234 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 POLHP1-201ENST00000411806 470 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC080125.1-201ENST00000414888 684 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AL160275.3-201ENST00000423876 471 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AL353729.1-201ENST00000425044 720 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 RPS15AP5-201ENST00000436276 388 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 RPS24P13-201ENST00000442520 397 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC128713.1-201ENST00000471495 306 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 SNORA64.4-201ENST00000516632 81 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 GLYCAM1-201ENST00000546596 285 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC026464.5-201ENST00000562497 722 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC005668.1-201ENST00000571142 476 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC092747.3-201ENST00000603769 301 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AL355598.1-201ENST00000604169 202 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC005000.2-201ENST00000605468 310 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 MIR15A-201ENST00000607334 83 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 uc_338.1-201ENST00000612113 180 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 RMST_7.1-201ENST00000621935 268 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LONRF3Q496Y0 AC026241.1-201ENST00000517873 2142 ntBASIC3.73□□□□□ -1.81
LONRF3Q496Y0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 SNORD56.3-201ENST00000363507 71 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 SNORA38.1-201ENST00000364172 131 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU6-715P-201ENST00000365204 103 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms