Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 HMGB1P31-201ENST00000437242 427 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 AC006512.1-201ENST00000468816 291 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SCN1BQ07699 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 RNU6-1178P-201ENST00000516674 107 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 MTCO2P4-201ENST00000517968 247 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.48□□□□□ -2.01
SCN1BQ07699 MTND2P38-201ENST00000522536 667 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 HPRT1P3-201ENST00000539521 576 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 MIR4444-1-201ENST00000581696 74 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 MIR4444-2-201ENST00000584390 74 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AC073410.2-201ENST00000603240 332 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AL121917.1-203ENST00000605534 577 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AC005046.1-201ENST00000608515 625 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN1BQ07699 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN1BQ07699 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCN1BQ07699 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCN1BQ07699 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN1BQ07699 Y_RNA.77-201ENST00000362962 107 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 RAP1BP3-201ENST00000407180 549 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 HMGN2P35-201ENST00000412164 270 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCN1BQ07699 MTCO1P19-201ENST00000443487 500 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AL139109.1-201ENST00000455491 297 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC117440.1-201ENST00000474107 571 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AL358832.1-201ENST00000497800 389 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN1BQ07699 AC010424.1-201ENST00000506336 297 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 HMGB3P3-201ENST00000510526 400 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN1BQ07699 Y_RNA.688-201ENST00000516565 95 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 SNORA43.2-201ENST00000516652 128 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 RPL7P20-201ENST00000520308 745 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 CR383656.8-201ENST00000549046 145 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.47□□□□□ -2.01
SCN1BQ07699 AC027176.1-201ENST00000560204 514 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC008945.2-201ENST00000606056 604 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.47□□□□□ -2.01
SCN1BQ07699 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 MIR5739-201ENST00000619803 80 ntBASIC2.47□□□□□ -2.01
SCN1BQ07699 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.47□□□□□ -2.01
SCN1BQ07699 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SCN1BQ07699 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN1BQ07699 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 RNU2-3P-201ENST00000410144 191 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 RNU4-46P-201ENST00000410818 138 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 MTCO2P34-201ENST00000421994 607 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.46□□□□□ -2.02
SCN1BQ07699 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 MTCO2P16-201ENST00000436962 677 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 MTND1P18-201ENST00000448191 573 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AC006026.2-201ENST00000457376 180 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AC068781.1-201ENST00000488231 618 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 RPL37P25-201ENST00000507308 276 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 AC117532.1-201ENST00000514638 323 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.46□□□□□ -2.02
SCN1BQ07699 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 AL356057.1-201ENST00000533798 831 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 BNIP3P6-201ENST00000549284 499 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 PSMA3P-201ENST00000555485 635 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 MIR4703-201ENST00000577728 79 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 MIR5004-201ENST00000579078 107 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 RSL24D1P11-201ENST00000591045 491 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 RPL12P50-201ENST00000603116 116 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 AL713866.2-201ENST00000603579 219 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.46□□□□□ -2.02
SCN1BQ07699 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SCN1BQ07699 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
SCN1BQ07699 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SCN1BQ07699 RNU6-1303P-201ENST00000364841 107 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 RNU6-487P-201ENST00000365430 104 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 SNORA54-201ENST00000384281 123 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 RNU1-57P-201ENST00000384491 166 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 RNA5SP171-201ENST00000391071 115 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 RNU6-607P-201ENST00000411283 108 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.45□□□□□ -2.02
SCN1BQ07699 CYCSP33-201ENST00000414485 327 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC008267.5-201ENST00000424928 265 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AL669831.1-202ENST00000428504 417 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.45□□□□□ -2.02
SCN1BQ07699 GTF2IP13-201ENST00000438487 386 ntBASIC2.45□□□□□ -2.02
SCN1BQ07699 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms