Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCNA1P78396 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCNA1P78396 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCNA1P78396 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCNA1P78396 RNU6-288P-201ENST00000363690 104 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCNA1P78396 PIGPP2-201ENST00000411569 458 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCNA1P78396 AL158823.1-201ENST00000418441 478 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AC106883.1-201ENST00000418805 562 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 BTF3P15-201ENST00000455606 336 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 RNU6-953P-201ENST00000459154 107 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AC140059.1-201ENST00000489238 361 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 RPL39P36-201ENST00000490784 156 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNA1P78396 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CCNA1P78396 SNORA25.11-201ENST00000515935 105 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.06□□□□□ -2.08
CCNA1P78396 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.06□□□□□ -2.08
CCNA1P78396 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.06□□□□□ -2.08
CCNA1P78396 AC243960.4-201ENST00000600532 288 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 APOOP1-201ENST00000604695 592 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AL592221.1-201ENST00000605266 382 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 AL356596.1-201ENST00000624230 379 ntBASIC2.06□□□□□ -2.08
CCNA1P78396 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.06□□□□□ -2.08
CCNA1P78396 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCNA1P78396 MIR337-201ENST00000362281 93 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 SNORA25B-201ENST00000365507 128 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 U8.10-201ENST00000384260 133 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 RNU6-83P-201ENST00000384568 112 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 MIR301A-201ENST00000385261 86 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 MIR1305-201ENST00000408300 86 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 AL445669.1-201ENST00000426743 755 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.05□□□□□ -2.08
CCNA1P78396 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNA1P78396 AC084290.1-201ENST00000434995 374 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNA1P78396 RPL23AP35-201ENST00000451906 501 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 snoU109.1-201ENST00000459339 135 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.05□□□□□ -2.08
CCNA1P78396 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCNA1P78396 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCNA1P78396 SNORA4.4-201ENST00000515921 135 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.05□□□□□ -2.08
CCNA1P78396 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.05□□□□□ -2.08
CCNA1P78396 VN1R82P-201ENST00000601481 356 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AL391001.1-201ENST00000602747 715 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AL670379.10-201ENST00000604330 253 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AL670379.9-201ENST00000605428 253 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
CCNA1P78396 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
CCNA1P78396 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCNA1P78396 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 RNU5A-8P-201ENST00000364102 114 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 RNU6-188P-201ENST00000364207 107 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 RNU6-723P-201ENST00000383973 107 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNA1P78396 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNA1P78396 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCNA1P78396 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.04□□□□□ -2.08
CCNA1P78396 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNA1P78396 MTND6P13-201ENST00000443510 523 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNA1P78396 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.04□□□□□ -2.08
CCNA1P78396 KATNBL1P6-201ENST00000453433 915 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 AL163540.1-201ENST00000485382 386 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCNA1P78396 OR5AL2P-201ENST00000532185 920 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.04□□□□□ -2.08
CCNA1P78396 MTND1P8-201ENST00000571424 950 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 MIR4293-201ENST00000584305 78 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.04□□□□□ -2.08
CCNA1P78396 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.04□□□□□ -2.08
CCNA1P78396 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCNA1P78396 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.04□□□□□ -2.08
CCNA1P78396 AC092125.1-201ENST00000562568 1995 ntBASIC2.03□□□□□ -2.08
CCNA1P78396 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCNA1P78396 AL354685.2-201ENST00000448218 1447 ntBASIC2.03□□□□□ -2.08
CCNA1P78396 RNU1-72P-201ENST00000362976 153 ntBASIC2.03□□□□□ -2.08
CCNA1P78396 RNU6-433P-201ENST00000363216 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms