Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM4P67936 BNIP3P27-201ENST00000599991 412 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AF131215.7-201ENST00000602443 707 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AC004987.4-201ENST00000603383 338 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
TPM4P67936 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.41□□□□□ -2.18
TPM4P67936 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AP000676.3-201ENST00000623299 569 ntBASIC1.41□□□□□ -2.18
TPM4P67936 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPM4P67936 RNU6-546P-201ENST00000383991 107 ntBASIC1.4□□□□□ -2.19
TPM4P67936 SNORA48.1-201ENST00000390879 135 ntBASIC1.4□□□□□ -2.19
TPM4P67936 RPL17P35-201ENST00000432217 549 ntBASIC1.4□□□□□ -2.19
TPM4P67936 AC005094.1-201ENST00000440420 368 ntBASIC1.4□□□□□ -2.19
TPM4P67936 AC119751.5-201ENST00000514077 770 ntBASIC1.4□□□□□ -2.19
TPM4P67936 AC027338.1-201ENST00000514840 825 ntBASIC1.4□□□□□ -2.19
TPM4P67936 RNY4P37-201ENST00000516225 96 ntBASIC1.4□□□□□ -2.19
TPM4P67936 RNU2-53P-201ENST00000516257 147 ntBASIC1.4□□□□□ -2.19
TPM4P67936 RNU6-572P-201ENST00000516724 80 ntBASIC1.4□□□□□ -2.19
TPM4P67936 RNU6-334P-201ENST00000517072 102 ntBASIC1.4□□□□□ -2.19
TPM4P67936 AC021451.1-201ENST00000523498 1129 ntBASIC1.4□□□□□ -2.19
TPM4P67936 AL133445.2-201ENST00000611191 527 ntBASIC1.4□□□□□ -2.19
TPM4P67936 MIR8074-201ENST00000615081 81 ntBASIC1.4□□□□□ -2.19
TPM4P67936 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.19
TPM4P67936 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TPM4P67936 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TPM4P67936 RNU6-288P-201ENST00000363690 104 ntBASIC1.39□□□□□ -2.19
TPM4P67936 RNU6-439P-201ENST00000384188 106 ntBASIC1.39□□□□□ -2.19
TPM4P67936 RNU6-1274P-201ENST00000384557 107 ntBASIC1.39□□□□□ -2.19
TPM4P67936 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TPM4P67936 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
TPM4P67936 MTND3P20-201ENST00000407663 186 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM4P67936 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM4P67936 UBE2D3P3-201ENST00000426992 425 ntBASIC1.39□□□□□ -2.19
TPM4P67936 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM4P67936 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM4P67936 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM4P67936 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AP003033.1-201ENST00000527244 415 ntBASIC1.39□□□□□ -2.19
TPM4P67936 DEFB130C-202ENST00000530001 230 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AP004247.1-201ENST00000531556 1289 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM4P67936 AC126365.2-201ENST00000580630 379 ntBASIC1.39□□□□□ -2.19
TPM4P67936 MIR4513-201ENST00000581077 86 ntBASIC1.39□□□□□ -2.19
TPM4P67936 WISP1-OT1-201ENST00000602893 642 ntBASIC1.39□□□□□ -2.19
TPM4P67936 AC090970.3-201ENST00000612566 866 ntBASIC1.39□□□□□ -2.19
TPM4P67936 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
TPM4P67936 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM4P67936 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.39□□□□□ -2.19
TPM4P67936 CBX3P1-201ENST00000325243 554 ntBASIC1.38□□□□□ -2.19
TPM4P67936 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
TPM4P67936 RNU6-1010P-201ENST00000362757 107 ntBASIC1.38□□□□□ -2.19
TPM4P67936 Y_RNA.111-201ENST00000363248 100 ntBASIC1.38□□□□□ -2.19
TPM4P67936 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TPM4P67936 FTH1P15-201ENST00000406984 280 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM4P67936 MTCO2P1-201ENST00000424648 477 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM4P67936 AC017099.1-201ENST00000448261 1028 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AC109329.1-201ENST00000518744 317 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM4P67936 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM4P67936 AC022616.8-201ENST00000533569 253 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AP003034.1-201ENST00000534621 422 ntBASIC1.38□□□□□ -2.19
TPM4P67936 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM4P67936 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM4P67936 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM4P67936 AL050343.2-201ENST00000607338 280 ntBASIC1.38□□□□□ -2.19
TPM4P67936 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM4P67936 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
TPM4P67936 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM4P67936 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TPM4P67936 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM4P67936 ZNF29P-201ENST00000225587 168 ntBASIC1.37□□□□□ -2.19
TPM4P67936 MIR186-201ENST00000384988 86 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM4P67936 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM4P67936 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM4P67936 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM4P67936 AC104058.1-201ENST00000448028 297 ntBASIC1.37□□□□□ -2.19
TPM4P67936 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM4P67936 RNU7-59P-201ENST00000459101 61 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AL121594.1-201ENST00000475906 575 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM4P67936 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM4P67936 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM4P67936 RNU1-41P-201ENST00000516161 162 ntBASIC1.37□□□□□ -2.19
TPM4P67936 RNU1-48P-201ENST00000516400 162 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.37□□□□□ -2.19
TPM4P67936 AC087897.1-201ENST00000550134 156 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
TPM4P67936 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM4P67936 AC090186.1-201ENST00000605991 572 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AC093788.1-201ENST00000609356 927 ntBASIC1.37□□□□□ -2.19
TPM4P67936 Z82243.1-201ENST00000609432 473 ntBASIC1.37□□□□□ -2.19
TPM4P67936 AC004908.3-201ENST00000610248 625 ntBASIC1.37□□□□□ -2.19
TPM4P67936 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TPM4P67936 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms