Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN4P51793 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN4P51793 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 OR4G2P-201ENST00000328113 903 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 RNU1-100P-201ENST00000365255 165 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 UBE2V1P10-201ENST00000414685 269 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 ISCA1P1-201ENST00000426679 387 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 TIMM9P3-201ENST00000428659 274 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.67□□□□□ -1.98
CLCN4P51793 AL592045.1-201ENST00000429867 352 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AL591212.2-201ENST00000433923 257 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 GPR143P-201ENST00000434155 205 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCN4P51793 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AL451074.3-201ENST00000437709 472 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 PSPHP1-201ENST00000450062 261 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 FABP5P15-201ENST00000453566 214 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCN4P51793 snoU13.15-201ENST00000459407 104 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC007182.2-201ENST00000489251 402 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 RPS29P20-201ENST00000489592 171 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 RPS27P26-201ENST00000494583 239 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 RPS29P21-201ENST00000496272 170 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.67□□□□□ -1.98
CLCN4P51793 AC019235.1-201ENST00000503847 207 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 SUMO2P6-201ENST00000505273 288 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCN4P51793 SNORD27.1-201ENST00000516319 72 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCN4P51793 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.67□□□□□ -1.98
CLCN4P51793 FAM92A1P1-201ENST00000528023 890 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AP003034.1-201ENST00000534621 422 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN4P51793 ZNF519P2-201ENST00000557032 169 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 MIR7843-201ENST00000622274 79 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLCN4P51793 AC009161.2-201ENST00000624626 138 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 MTND5P42-201ENST00000637720 498 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC068137.3-201ENST00000639191 341 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 AC073869.6-201ENST00000640656 341 ntBASIC2.67□□□□□ -1.98
CLCN4P51793 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN4P51793 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN4P51793 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLCN4P51793 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLCN4P51793 RNU6-641P-201ENST00000384006 107 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 RNU6-190P-201ENST00000384154 102 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCN4P51793 MTCO3P40-201ENST00000392516 676 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 RNU6-648P-201ENST00000410190 107 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 RNU4-55P-201ENST00000410731 137 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AL365496.1-201ENST00000426885 215 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN4P51793 AC073464.1-201ENST00000429823 534 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCN4P51793 AC079781.2-201ENST00000446424 169 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 MRPL50P4-201ENST00000446432 475 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC003071.1-201ENST00000451219 789 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN4P51793 AP000852.1-201ENST00000472460 573 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 RPL36AP51-201ENST00000487216 318 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN4P51793 RNU6-410P-201ENST00000517006 107 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCN4P51793 AP001893.2-201ENST00000526949 202 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCN4P51793 AL359212.1-201ENST00000556608 614 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC009163.5-201ENST00000575421 637 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC174048.1-201ENST00000603389 144 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC007938.3-201ENST00000604965 623 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC092954.2-201ENST00000609103 430 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC007684.1-201ENST00000609671 477 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 DUSP12P1-201ENST00000612874 516 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC090517.2-201ENST00000614966 680 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 AC005609.4-201ENST00000625071 447 ntBASIC2.66□□□□□ -1.98
CLCN4P51793 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CLCN4P51793 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CLCN4P51793 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLCN4P51793 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLCN4P51793 Y_RNA.1-201ENST00000352915 104 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 MIR504-201ENST00000385065 83 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 CALM2P3-201ENST00000400429 449 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RNA5SP425-201ENST00000410336 112 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RNU2-39P-201ENST00000410604 198 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 FCF1P9-201ENST00000412546 282 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.65□□□□□ -1.99
CLCN4P51793 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCN4P51793 AC080125.1-201ENST00000414888 684 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RPL23AP30-201ENST00000432419 501 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 USP9YP28-201ENST00000435142 589 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RPS15AP9-201ENST00000439856 381 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLCN4P51793 AC023194.1-201ENST00000493084 308 ntBASIC2.65□□□□□ -1.99
CLCN4P51793 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms