Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
RPL35P42766 SNORD114-19-201ENST00000363072 75 ntBASIC0.85□□□□□ -2.27
RPL35P42766 RNU6-1274P-201ENST00000384557 107 ntBASIC0.85□□□□□ -2.27
RPL35P42766 SNORD65.1-201ENST00000390889 71 ntBASIC0.85□□□□□ -2.27
RPL35P42766 SNORA67.5-201ENST00000391036 107 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.85□□□□□ -2.27
RPL35P42766 NCOR1P3-201ENST00000420479 303 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.85□□□□□ -2.27
RPL35P42766 MTCO1P44-201ENST00000441935 243 ntBASIC0.85□□□□□ -2.27
RPL35P42766 BRK1P2-201ENST00000442875 223 ntBASIC0.85□□□□□ -2.27
RPL35P42766 SEPT14P24-201ENST00000447236 180 ntBASIC0.85□□□□□ -2.27
RPL35P42766 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
RPL35P42766 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPL35P42766 TRBV12-1-201ENST00000479785 344 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC108729.1-201ENST00000487812 947 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.85□□□□□ -2.27
RPL35P42766 RNU2-53P-201ENST00000516257 147 ntBASIC0.85□□□□□ -2.27
RPL35P42766 RN7SKP258-201ENST00000517151 304 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL35P42766 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL35P42766 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL35P42766 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.85□□□□□ -2.27
RPL35P42766 AP003122.4-201ENST00000530980 758 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL35P42766 MIR4782-201ENST00000577987 79 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC073413.2-201ENST00000604332 360 ntBASIC0.85□□□□□ -2.27
RPL35P42766 AC098614.4-201ENST00000607601 462 ntBASIC0.85□□□□□ -2.27
RPL35P42766 Z82243.1-201ENST00000609432 473 ntBASIC0.85□□□□□ -2.27
RPL35P42766 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
RPL35P42766 RNU4-91P-201ENST00000364778 135 ntBASIC0.84□□□□□ -2.27
RPL35P42766 SNORA70B-201ENST00000384210 135 ntBASIC0.84□□□□□ -2.27
RPL35P42766 RPS27P16-201ENST00000425758 201 ntBASIC0.84□□□□□ -2.27
RPL35P42766 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL35P42766 MTND2P20-201ENST00000440805 661 ntBASIC0.84□□□□□ -2.27
RPL35P42766 AC098799.1-201ENST00000504752 800 ntBASIC0.84□□□□□ -2.27
RPL35P42766 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL35P42766 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL35P42766 AC022616.8-201ENST00000533569 253 ntBASIC0.84□□□□□ -2.27
RPL35P42766 OR6C7P-201ENST00000547875 934 ntBASIC0.84□□□□□ -2.27
RPL35P42766 LINC00557-201ENST00000563184 1279 ntBASIC0.84□□□□□ -2.27
RPL35P42766 SNORA77B-201ENST00000578179 125 ntBASIC0.84□□□□□ -2.27
RPL35P42766 AC023043.2-201ENST00000589678 1026 ntBASIC0.84□□□□□ -2.27
RPL35P42766 AC073410.2-201ENST00000603240 332 ntBASIC0.84□□□□□ -2.27
RPL35P42766 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.84□□□□□ -2.28
RPL35P42766 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.83□□□□□ -2.28
RPL35P42766 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPL35P42766 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 CST2P1-201ENST00000425770 87 ntBASIC0.83□□□□□ -2.28
RPL35P42766 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 AL133373.1-201ENST00000497098 94 ntBASIC0.83□□□□□ -2.28
RPL35P42766 AC026414.1-201ENST00000504046 698 ntBASIC0.83□□□□□ -2.28
RPL35P42766 AC109329.1-201ENST00000518744 317 ntBASIC0.83□□□□□ -2.28
RPL35P42766 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL35P42766 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.83□□□□□ -2.28
RPL35P42766 AC093012.1-202ENST00000549403 582 ntBASIC0.83□□□□□ -2.28
RPL35P42766 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.83□□□□□ -2.28
RPL35P42766 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL35P42766 AC009269.6-201ENST00000621778 588 ntBASIC0.83□□□□□ -2.28
RPL35P42766 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL35P42766 RNU6-707P-201ENST00000364647 95 ntBASIC0.82□□□□□ -2.28
RPL35P42766 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
RPL35P42766 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL35P42766 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
RPL35P42766 RNU2-42P-201ENST00000410697 113 ntBASIC0.82□□□□□ -2.28
RPL35P42766 RPL21P24-201ENST00000413752 448 ntBASIC0.82□□□□□ -2.28
RPL35P42766 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
RPL35P42766 CYCSP49-201ENST00000420810 319 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AC104651.1-201ENST00000427559 735 ntBASIC0.82□□□□□ -2.28
RPL35P42766 MTND4P6-201ENST00000438297 472 ntBASIC0.82□□□□□ -2.28
RPL35P42766 RPL32P28-201ENST00000443577 397 ntBASIC0.82□□□□□ -2.28
RPL35P42766 PRPS1P1-201ENST00000445305 876 ntBASIC0.82□□□□□ -2.28
RPL35P42766 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.82□□□□□ -2.28
RPL35P42766 UBE2DNL-203ENST00000474922 222 ntBASIC0.82□□□□□ -2.28
RPL35P42766 RPL30P7-201ENST00000479312 323 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
RPL35P42766 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL35P42766 HMGB1P28-201ENST00000507778 552 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.82□□□□□ -2.28
RPL35P42766 SLC2A13P1-201ENST00000531560 322 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AC023538.1-201ENST00000534576 736 ntBASIC0.82□□□□□ -2.28
RPL35P42766 RAB11AP2-201ENST00000545905 639 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AC090115.3-201ENST00000553218 849 ntBASIC0.82□□□□□ -2.28
RPL35P42766 HIGD1AP17-201ENST00000554576 276 ntBASIC0.82□□□□□ -2.28
RPL35P42766 DNAJC19P9-201ENST00000555084 351 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.82□□□□□ -2.28
RPL35P42766 AC012414.6-201ENST00000568241 401 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AC012360.2-201ENST00000609349 391 ntBASIC0.82□□□□□ -2.28
RPL35P42766 AL078604.3-201ENST00000615580 211 ntBASIC0.82□□□□□ -2.28
RPL35P42766 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL35P42766 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL35P42766 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.82□□□□□ -2.28
RPL35P42766 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPL35P42766 CDR1-202ENST00000625883 1485 ntBASIC0.81□□□□□ -2.28
RPL35P42766 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
RPL35P42766 MIR302D-201ENST00000362275 68 ntBASIC0.81□□□□□ -2.28
RPL35P42766 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
RPL35P42766 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms