Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 CASP1P1-201ENST00000526345 212 ntBASIC3.97□□□□□ -1.77
LTBRP36941 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBRP36941 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
LTBRP36941 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.97□□□□□ -1.77
LTBRP36941 AC006600.1-201ENST00000572529 153 ntBASIC3.97□□□□□ -1.77
LTBRP36941 MIR5696-201ENST00000578474 85 ntBASIC3.97□□□□□ -1.77
LTBRP36941 MIR3690-201ENST00000580266 75 ntBASIC3.97□□□□□ -1.77
LTBRP36941 MIR3124-201ENST00000582636 67 ntBASIC3.97□□□□□ -1.77
LTBRP36941 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.97□□□□□ -1.77
LTBRP36941 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBRP36941 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.97□□□□□ -1.77
LTBRP36941 AC140113.4-201ENST00000622087 222 ntBASIC3.97□□□□□ -1.77
LTBRP36941 AC090617.7-201ENST00000623952 126 ntBASIC3.97□□□□□ -1.77
LTBRP36941 U4.7-201ENST00000638126 106 ntBASIC3.97□□□□□ -1.77
LTBRP36941 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBRP36941 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LTBRP36941 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBRP36941 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
LTBRP36941 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBRP36941 MTND5P27-201ENST00000428871 1720 ntBASIC3.96□□□□□ -1.78
LTBRP36941 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
LTBRP36941 RNU6-78P-201ENST00000362897 107 ntBASIC3.96□□□□□ -1.78
LTBRP36941 U3.6-201ENST00000363622 211 ntBASIC3.96□□□□□ -1.78
LTBRP36941 RNU6-595P-201ENST00000363944 107 ntBASIC3.96□□□□□ -1.78
LTBRP36941 Y_RNA.210-201ENST00000364161 110 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 RNU6-700P-201ENST00000391043 107 ntBASIC3.96□□□□□ -1.78
LTBRP36941 RNU6-1109P-201ENST00000391187 107 ntBASIC3.96□□□□□ -1.78
LTBRP36941 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
LTBRP36941 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
LTBRP36941 MIR1252-201ENST00000408861 65 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC005300.1-201ENST00000428401 373 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.96□□□□□ -1.78
LTBRP36941 FTH1P6-201ENST00000430768 320 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.96□□□□□ -1.78
LTBRP36941 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.96□□□□□ -1.78
LTBRP36941 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.96□□□□□ -1.78
LTBRP36941 RNU6-1282P-201ENST00000516735 96 ntBASIC3.96□□□□□ -1.78
LTBRP36941 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.96□□□□□ -1.78
LTBRP36941 AC009812.2-201ENST00000517657 457 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC144568.1-201ENST00000520139 137 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC040926.1-201ENST00000530195 238 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
LTBRP36941 H3F3AP1-201ENST00000559984 334 ntBASIC3.96□□□□□ -1.78
LTBRP36941 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.96□□□□□ -1.78
LTBRP36941 AC100812.1-201ENST00000607622 580 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC005046.1-201ENST00000608515 625 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC006023.2-201ENST00000609916 167 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AC090425.1-201ENST00000610007 140 ntBASIC3.96□□□□□ -1.78
LTBRP36941 AL021879.1-201ENST00000611756 288 ntBASIC3.96□□□□□ -1.78
LTBRP36941 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.96□□□□□ -1.78
LTBRP36941 SCARNA4-202ENST00000625402 129 ntBASIC3.96□□□□□ -1.78
LTBRP36941 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.96□□□□□ -1.78
LTBRP36941 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
LTBRP36941 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.96□□□□□ -1.78
LTBRP36941 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
LTBRP36941 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LTBRP36941 RNU6-336P-201ENST00000364891 107 ntBASIC3.95□□□□□ -1.78
LTBRP36941 DEFB109C-201ENST00000382575 264 ntBASIC3.95□□□□□ -1.78
LTBRP36941 DEFB109B-201ENST00000382656 264 ntBASIC3.95□□□□□ -1.78
LTBRP36941 Y_RNA.500-201ENST00000384466 111 ntBASIC3.95□□□□□ -1.78
LTBRP36941 AC007098.1-201ENST00000420122 367 ntBASIC3.95□□□□□ -1.78
LTBRP36941 AC108059.2-201ENST00000434626 151 ntBASIC3.95□□□□□ -1.78
LTBRP36941 RPL22P13-201ENST00000493291 347 ntBASIC3.95□□□□□ -1.78
LTBRP36941 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 RNU6-703P-201ENST00000516946 107 ntBASIC3.95□□□□□ -1.78
LTBRP36941 RNU6-1183P-201ENST00000517054 60 ntBASIC3.95□□□□□ -1.78
LTBRP36941 Y_RNA.715-201ENST00000517082 110 ntBASIC3.95□□□□□ -1.78
LTBRP36941 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.95□□□□□ -1.78
LTBRP36941 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.95□□□□□ -1.78
LTBRP36941 CYCSP39-201ENST00000565821 309 ntBASIC3.95□□□□□ -1.78
LTBRP36941 MIR5701-3-201ENST00000578890 82 ntBASIC3.95□□□□□ -1.78
LTBRP36941 MIR5701-1-201ENST00000585138 82 ntBASIC3.95□□□□□ -1.78
LTBRP36941 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 AL355598.1-201ENST00000604169 202 ntBASIC3.95□□□□□ -1.78
LTBRP36941 AL137843.1-201ENST00000605078 385 ntBASIC3.95□□□□□ -1.78
LTBRP36941 FTX_3.1-201ENST00000610451 147 ntBASIC3.95□□□□□ -1.78
LTBRP36941 MIR5701-2-201ENST00000615634 82 ntBASIC3.95□□□□□ -1.78
LTBRP36941 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.95□□□□□ -1.78
LTBRP36941 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms