Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.42□□□□□ -2.02
USP6P35125 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.42□□□□□ -2.02
USP6P35125 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.42□□□□□ -2.02
USP6P35125 SNRPEP9-201ENST00000436794 238 ntBASIC2.42□□□□□ -2.02
USP6P35125 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.42□□□□□ -2.02
USP6P35125 RNU7-23P-201ENST00000459465 62 ntBASIC2.42□□□□□ -2.02
USP6P35125 RPS29P12-201ENST00000460178 152 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.42□□□□□ -2.02
USP6P35125 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
USP6P35125 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 DNAJC19P9-201ENST00000555084 351 ntBASIC2.42□□□□□ -2.02
USP6P35125 RPS3AP4-201ENST00000555161 764 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC008739.2-201ENST00000597006 317 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC007363.1-201ENST00000604736 620 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC121247.2-201ENST00000604776 136 ntBASIC2.42□□□□□ -2.02
USP6P35125 RPL23AP88-201ENST00000605759 454 ntBASIC2.42□□□□□ -2.02
USP6P35125 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP6P35125 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.42□□□□□ -2.02
USP6P35125 U3.4-201ENST00000363352 213 ntBASIC2.42□□□□□ -2.02
USP6P35125 SMIM11P1-201ENST00000369586 178 ntBASIC2.42□□□□□ -2.02
USP6P35125 SNORA67.5-201ENST00000391036 107 ntBASIC2.42□□□□□ -2.02
USP6P35125 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USP6P35125 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 AC104651.1-201ENST00000427559 735 ntBASIC2.42□□□□□ -2.02
USP6P35125 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 HMGB1P27-201ENST00000431429 603 ntBASIC2.42□□□□□ -2.02
USP6P35125 USP9YP15-201ENST00000442391 422 ntBASIC2.42□□□□□ -2.02
USP6P35125 MTND1P12-201ENST00000455231 147 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 AC140059.1-201ENST00000489238 361 ntBASIC2.42□□□□□ -2.02
USP6P35125 RPS27P26-201ENST00000494583 239 ntBASIC2.42□□□□□ -2.02
USP6P35125 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.42□□□□□ -2.02
USP6P35125 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 RNU2-46P-201ENST00000517038 113 ntBASIC2.42□□□□□ -2.02
USP6P35125 RNA5SP165-201ENST00000517142 115 ntBASIC2.42□□□□□ -2.02
USP6P35125 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP6P35125 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.42□□□□□ -2.02
USP6P35125 AC068276.1-201ENST00000605793 379 ntBASIC2.42□□□□□ -2.02
USP6P35125 AL589994.2-201ENST00000621124 579 ntBASIC2.42□□□□□ -2.02
USP6P35125 FRG1KP-201ENST00000623592 341 ntBASIC2.42□□□□□ -2.02
USP6P35125 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
USP6P35125 KPNA2P1-201ENST00000458289 1591 ntBASIC2.41□□□□□ -2.02
USP6P35125 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USP6P35125 RNU5E-1-201ENST00000362477 120 ntBASIC2.41□□□□□ -2.02
USP6P35125 RNU6-188P-201ENST00000364207 107 ntBASIC2.41□□□□□ -2.02
USP6P35125 RNA5SP37-201ENST00000365420 130 ntBASIC2.41□□□□□ -2.02
USP6P35125 RNA5SP354-201ENST00000391247 136 ntBASIC2.41□□□□□ -2.02
USP6P35125 MIR888-201ENST00000401186 77 ntBASIC2.41□□□□□ -2.02
USP6P35125 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.41□□□□□ -2.02
USP6P35125 AC009518.2-201ENST00000418056 731 ntBASIC2.41□□□□□ -2.02
USP6P35125 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USP6P35125 HMGN2P30-201ENST00000423237 256 ntBASIC2.41□□□□□ -2.02
USP6P35125 GPM6BP2-201ENST00000432046 144 ntBASIC2.41□□□□□ -2.02
USP6P35125 AC119618.1-201ENST00000434191 222 ntBASIC2.41□□□□□ -2.02
USP6P35125 MTND4P25-201ENST00000441039 533 ntBASIC2.41□□□□□ -2.02
USP6P35125 GPM6BP1-201ENST00000446387 144 ntBASIC2.41□□□□□ -2.02
USP6P35125 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.41□□□□□ -2.02
USP6P35125 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.41□□□□□ -2.02
USP6P35125 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.41□□□□□ -2.02
USP6P35125 Y_RNA.672-201ENST00000516289 104 ntBASIC2.41□□□□□ -2.02
USP6P35125 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.41□□□□□ -2.02
USP6P35125 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.41□□□□□ -2.02
USP6P35125 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.41□□□□□ -2.02
USP6P35125 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.41□□□□□ -2.02
USP6P35125 AL358072.1-201ENST00000604156 575 ntBASIC2.41□□□□□ -2.02
USP6P35125 AC091304.9-201ENST00000612091 226 ntBASIC2.41□□□□□ -2.02
USP6P35125 AC004852.3-201ENST00000614131 326 ntBASIC2.41□□□□□ -2.02
USP6P35125 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP6P35125 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.41□□□□□ -2.02
USP6P35125 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
USP6P35125 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USP6P35125 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
USP6P35125 SNORD56.2-201ENST00000363242 71 ntBASIC2.4□□□□□ -2.03
USP6P35125 RNU6-960P-201ENST00000364056 120 ntBASIC2.4□□□□□ -2.03
USP6P35125 RNY3P10-201ENST00000384764 102 ntBASIC2.4□□□□□ -2.03
USP6P35125 RPS3AP3-201ENST00000411933 242 ntBASIC2.4□□□□□ -2.03
USP6P35125 AP000275.1-201ENST00000411943 390 ntBASIC2.4□□□□□ -2.03
USP6P35125 ISCA1P1-201ENST00000426679 387 ntBASIC2.4□□□□□ -2.03
USP6P35125 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.4□□□□□ -2.03
USP6P35125 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.4□□□□□ -2.03
USP6P35125 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.4□□□□□ -2.03
USP6P35125 MTND6P13-201ENST00000443510 523 ntBASIC2.4□□□□□ -2.03
USP6P35125 FABP5P15-201ENST00000453566 214 ntBASIC2.4□□□□□ -2.03
USP6P35125 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.4□□□□□ -2.03
USP6P35125 SUMO2P6-201ENST00000505273 288 ntBASIC2.4□□□□□ -2.03
USP6P35125 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.4□□□□□ -2.03
USP6P35125 RNA5SP480-201ENST00000516840 109 ntBASIC2.4□□□□□ -2.03
USP6P35125 RNU6-1092P-201ENST00000516955 87 ntBASIC2.4□□□□□ -2.03
USP6P35125 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.4□□□□□ -2.03
USP6P35125 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.4□□□□□ -2.03
USP6P35125 AC011979.2-201ENST00000527568 352 ntBASIC2.4□□□□□ -2.03
USP6P35125 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.4□□□□□ -2.03
USP6P35125 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.4□□□□□ -2.03
USP6P35125 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.4□□□□□ -2.03
USP6P35125 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.4□□□□□ -2.03
USP6P35125 AC005771.1-201ENST00000585581 349 ntBASIC2.4□□□□□ -2.03
USP6P35125 AC068880.5-201ENST00000624331 290 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms