Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RAB11AP2-201ENST00000545905 639 ntBASIC0.89□□□□□ -2.27
SDC4P31431 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
SDC4P31431 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.89□□□□□ -2.27
SDC4P31431 MIR4781-201ENST00000585250 76 ntBASIC0.89□□□□□ -2.27
SDC4P31431 HAUS6P2-201ENST00000433254 2404 ntBASIC0.88□□□□□ -2.27
SDC4P31431 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SDC4P31431 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.88□□□□□ -2.27
SDC4P31431 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
SDC4P31431 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SDC4P31431 MIR506-201ENST00000384998 124 ntBASIC0.88□□□□□ -2.27
SDC4P31431 MIR1262-201ENST00000408276 93 ntBASIC0.88□□□□□ -2.27
SDC4P31431 RNU2-48P-201ENST00000410694 191 ntBASIC0.88□□□□□ -2.27
SDC4P31431 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.88□□□□□ -2.27
SDC4P31431 CST2P1-201ENST00000425770 87 ntBASIC0.88□□□□□ -2.27
SDC4P31431 RPS15AP9-201ENST00000439856 381 ntBASIC0.88□□□□□ -2.27
SDC4P31431 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.88□□□□□ -2.27
SDC4P31431 RNU6-927P-201ENST00000516199 100 ntBASIC0.88□□□□□ -2.27
SDC4P31431 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.88□□□□□ -2.27
SDC4P31431 COPS8P3-201ENST00000526024 482 ntBASIC0.88□□□□□ -2.27
SDC4P31431 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.88□□□□□ -2.27
SDC4P31431 AC008015.1-201ENST00000555505 465 ntBASIC0.88□□□□□ -2.27
SDC4P31431 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
SDC4P31431 AL022345.1-201ENST00000607292 135 ntBASIC0.88□□□□□ -2.27
SDC4P31431 AL590396.4-201ENST00000636779 956 ntBASIC0.88□□□□□ -2.27
SDC4P31431 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
SDC4P31431 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.88□□□□□ -2.27
SDC4P31431 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RNU6-492P-201ENST00000363035 104 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RNU6-658P-201ENST00000384606 106 ntBASIC0.87□□□□□ -2.27
SDC4P31431 SNORD65C-201ENST00000390962 71 ntBASIC0.87□□□□□ -2.27
SDC4P31431 ISCA1P6-201ENST00000427740 390 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
SDC4P31431 MTND1P18-201ENST00000448191 573 ntBASIC0.87□□□□□ -2.27
SDC4P31431 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.87□□□□□ -2.27
SDC4P31431 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.87□□□□□ -2.27
SDC4P31431 MEMO1P3-201ENST00000459811 302 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RPS26P55-201ENST00000471178 356 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RPL21P47-201ENST00000483696 477 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC091860.1-201ENST00000505723 432 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC109927.2-201ENST00000506416 303 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC034244.1-201ENST00000507687 207 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.87□□□□□ -2.27
SDC4P31431 AC008837.2-201ENST00000513076 418 ntBASIC0.87□□□□□ -2.27
SDC4P31431 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RN7SL622P-201ENST00000585292 275 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.87□□□□□ -2.27
SDC4P31431 BBIP1P1-201ENST00000602999 279 ntBASIC0.87□□□□□ -2.27
SDC4P31431 AC004492.1-201ENST00000607036 742 ntBASIC0.87□□□□□ -2.27
SDC4P31431 RNU6-1164P-201ENST00000364428 107 ntBASIC0.86□□□□□ -2.27
SDC4P31431 SUGT1P1-201ENST00000379514 476 ntBASIC0.86□□□□□ -2.27
SDC4P31431 MIR217-201ENST00000384817 110 ntBASIC0.86□□□□□ -2.27
SDC4P31431 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.86□□□□□ -2.27
SDC4P31431 AC007000.2-201ENST00000442564 487 ntBASIC0.86□□□□□ -2.27
SDC4P31431 PRELID3BP1-201ENST00000457142 540 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC011005.2-201ENST00000487324 359 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC008628.1-201ENST00000508663 265 ntBASIC0.86□□□□□ -2.27
SDC4P31431 RNU6-586P-201ENST00000517265 104 ntBASIC0.86□□□□□ -2.27
SDC4P31431 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.86□□□□□ -2.27
SDC4P31431 AP000763.2-201ENST00000540641 163 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
SDC4P31431 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.86□□□□□ -2.27
SDC4P31431 AC104229.1-201ENST00000561364 255 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC012414.6-201ENST00000568241 401 ntBASIC0.86□□□□□ -2.27
SDC4P31431 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.86□□□□□ -2.27
SDC4P31431 BNIP3P27-201ENST00000599991 412 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.86□□□□□ -2.27
SDC4P31431 AL136313.1-201ENST00000624804 202 ntBASIC0.86□□□□□ -2.27
SDC4P31431 AC092125.1-201ENST00000562568 1995 ntBASIC0.86□□□□□ -2.27
SDC4P31431 MTND5P35-201ENST00000557537 1720 ntBASIC0.86□□□□□ -2.27
SDC4P31431 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
SDC4P31431 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
SDC4P31431 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SDC4P31431 RNU6-1078P-201ENST00000364522 103 ntBASIC0.85□□□□□ -2.27
SDC4P31431 RNU6-1032P-201ENST00000384100 107 ntBASIC0.85□□□□□ -2.27
SDC4P31431 SRIP3-201ENST00000413200 219 ntBASIC0.85□□□□□ -2.27
SDC4P31431 CYCSP33-201ENST00000414485 327 ntBASIC0.85□□□□□ -2.27
SDC4P31431 FO393414.1-201ENST00000428697 1184 ntBASIC0.85□□□□□ -2.27
SDC4P31431 MTND4LP14-201ENST00000429447 288 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.85□□□□□ -2.27
SDC4P31431 AC234064.1-201ENST00000436312 247 ntBASIC0.85□□□□□ -2.27
SDC4P31431 MTCYBP11-201ENST00000447254 1109 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.85□□□□□ -2.27
SDC4P31431 AC092001.1-201ENST00000453012 261 ntBASIC0.85□□□□□ -2.27
SDC4P31431 GTF2IP12-201ENST00000456547 356 ntBASIC0.85□□□□□ -2.27
SDC4P31431 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AC108729.1-201ENST00000487812 947 ntBASIC0.85□□□□□ -2.27
SDC4P31431 PTP4A1P4-201ENST00000512479 322 ntBASIC0.85□□□□□ -2.27
SDC4P31431 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
SDC4P31431 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.85□□□□□ -2.27
SDC4P31431 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.85□□□□□ -2.27
SDC4P31431 AP005136.1-201ENST00000579765 429 ntBASIC0.85□□□□□ -2.27
SDC4P31431 NIFKP6-201ENST00000598115 845 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.85□□□□□ -2.27
SDC4P31431 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
SDC4P31431 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.85□□□□□ -2.27
SDC4P31431 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms