Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CYCSP26-201ENST00000534107 320 ntBASIC4.96□□□□□ -1.62
VARSP26640 BNIP3P1-201ENST00000547295 580 ntBASIC4.96□□□□□ -1.62
VARSP26640 AC133555.2-201ENST00000550213 292 ntBASIC4.96□□□□□ -1.62
VARSP26640 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.96□□□□□ -1.62
VARSP26640 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.96□□□□□ -1.62
VARSP26640 MIR3921-201ENST00000577308 85 ntBASIC4.96□□□□□ -1.62
VARSP26640 MIR4480-201ENST00000582492 71 ntBASIC4.96□□□□□ -1.62
VARSP26640 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.96□□□□□ -1.62
VARSP26640 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.96□□□□□ -1.62
VARSP26640 AP005432.2-201ENST00000608162 586 ntBASIC4.96□□□□□ -1.62
VARSP26640 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARSP26640 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARSP26640 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VARSP26640 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VARSP26640 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.96□□□□□ -1.62
VARSP26640 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
VARSP26640 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.95□□□□□ -1.62
VARSP26640 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 AC010300.1-201ENST00000600671 5134 ntBASIC4.95□□□□□ -1.62
VARSP26640 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VARSP26640 RNU6-103P-201ENST00000363686 107 ntBASIC4.95□□□□□ -1.62
VARSP26640 RNU1-106P-201ENST00000384382 164 ntBASIC4.95□□□□□ -1.62
VARSP26640 SNORD37.2-201ENST00000391075 66 ntBASIC4.95□□□□□ -1.62
VARSP26640 FAR2P2-201ENST00000413041 594 ntBASIC4.95□□□□□ -1.62
VARSP26640 RPL27AP8-201ENST00000424277 446 ntBASIC4.95□□□□□ -1.62
VARSP26640 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.95□□□□□ -1.62
VARSP26640 AC112220.1-201ENST00000434628 355 ntBASIC4.95□□□□□ -1.62
VARSP26640 RPL35AP21-201ENST00000437667 333 ntBASIC4.95□□□□□ -1.62
VARSP26640 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.95□□□□□ -1.62
VARSP26640 snoU13.6-201ENST00000458785 104 ntBASIC4.95□□□□□ -1.62
VARSP26640 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.95□□□□□ -1.62
VARSP26640 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 RAC1P5-201ENST00000512182 576 ntBASIC4.95□□□□□ -1.62
VARSP26640 HSPE1P4-201ENST00000550617 308 ntBASIC4.95□□□□□ -1.62
VARSP26640 AC127455.1-201ENST00000565496 145 ntBASIC4.95□□□□□ -1.62
VARSP26640 CYCSP39-201ENST00000565821 309 ntBASIC4.95□□□□□ -1.62
VARSP26640 MIR5571-201ENST00000577998 113 ntBASIC4.95□□□□□ -1.62
VARSP26640 MIR3613-201ENST00000579844 87 ntBASIC4.95□□□□□ -1.62
VARSP26640 AC020895.1-201ENST00000595362 272 ntBASIC4.95□□□□□ -1.62
VARSP26640 AC105254.2-201ENST00000603636 436 ntBASIC4.95□□□□□ -1.62
VARSP26640 AL356157.2-201ENST00000605122 111 ntBASIC4.95□□□□□ -1.62
VARSP26640 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.95□□□□□ -1.62
VARSP26640 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
VARSP26640 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.95□□□□□ -1.62
VARSP26640 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VARSP26640 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.95□□□□□ -1.62
VARSP26640 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARSP26640 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VARSP26640 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 NEAT1-202ENST00000501122 22743 ntBASIC4.94□□□□□ -1.62
VARSP26640 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.94□□□□□ -1.62
VARSP26640 Y_RNA.179-201ENST00000363844 90 ntBASIC4.94□□□□□ -1.62
VARSP26640 SNORA36A-201ENST00000384221 132 ntBASIC4.94□□□□□ -1.62
VARSP26640 U3.22-201ENST00000391120 215 ntBASIC4.94□□□□□ -1.62
VARSP26640 RNU2-54P-201ENST00000410299 190 ntBASIC4.94□□□□□ -1.62
VARSP26640 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.94□□□□□ -1.62
VARSP26640 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 AC083982.1-201ENST00000485679 344 ntBASIC4.94□□□□□ -1.62
VARSP26640 RNA5SP54-201ENST00000516951 92 ntBASIC4.94□□□□□ -1.62
VARSP26640 CYCSP23-201ENST00000519781 313 ntBASIC4.94□□□□□ -1.62
VARSP26640 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.94□□□□□ -1.62
VARSP26640 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 AC005520.5-201ENST00000613926 164 ntBASIC4.94□□□□□ -1.62
VARSP26640 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 AC090132.2-201ENST00000615881 347 ntBASIC4.94□□□□□ -1.62
VARSP26640 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VARSP26640 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VARSP26640 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VARSP26640 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VARSP26640 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VARSP26640 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
VARSP26640 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VARSP26640 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VARSP26640 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VARSP26640 RNU1-94P-201ENST00000362627 173 ntBASIC4.93□□□□□ -1.62
VARSP26640 SNORD56.1-201ENST00000362913 68 ntBASIC4.93□□□□□ -1.62
VARSP26640 RNU6-942P-201ENST00000363002 107 ntBASIC4.93□□□□□ -1.62
VARSP26640 snoU2_19.4-201ENST00000364329 80 ntBASIC4.93□□□□□ -1.62
VARSP26640 RNA5SP455-201ENST00000365190 119 ntBASIC4.93□□□□□ -1.62
VARSP26640 Y_RNA.329-201ENST00000365209 107 ntBASIC4.93□□□□□ -1.62
VARSP26640 RNU6-629P-201ENST00000384061 103 ntBASIC4.93□□□□□ -1.62
VARSP26640 RNU6-476P-201ENST00000384726 107 ntBASIC4.93□□□□□ -1.62
VARSP26640 DDX39BP1-205ENST00000422507 192 ntBASIC4.93□□□□□ -1.62
VARSP26640 FTH1P6-201ENST00000430768 320 ntBASIC4.93□□□□□ -1.62
VARSP26640 AL049745.1-201ENST00000433953 286 ntBASIC4.93□□□□□ -1.62
VARSP26640 SNRPEP9-201ENST00000436794 238 ntBASIC4.93□□□□□ -1.62
VARSP26640 AL357134.1-201ENST00000445848 426 ntBASIC4.93□□□□□ -1.62
VARSP26640 AURKAPS2-201ENST00000454983 333 ntBASIC4.93□□□□□ -1.62
VARSP26640 AC011276.1-201ENST00000469688 323 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms