Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU7-26P-201ENST00000458980 63 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A2P08572 MTCYBP43-201ENST00000513621 740 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A2P08572 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A2P08572 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A2P08572 MTATP6P3-201ENST00000581686 676 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.33□□□□□ -2.2
COL4A2P08572 OR1M4P-201ENST00000589199 287 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A2P08572 VN1R82P-201ENST00000601481 356 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.33□□□□□ -2.2
COL4A2P08572 AC005332.10-201ENST00000612725 619 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 AC097655.1-201ENST00000635075 318 ntBASIC1.33□□□□□ -2.2
COL4A2P08572 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL4A2P08572 RNU6-1284P-201ENST00000363701 100 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 SEPT2P1-201ENST00000419651 180 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A2P08572 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A2P08572 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 AL441985.1-201ENST00000457727 251 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC008526.1-201ENST00000509149 338 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC010587.2-201ENST00000511727 448 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 RNA5SP220-201ENST00000516298 104 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 RNU6-703P-201ENST00000516946 107 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.32□□□□□ -2.2
COL4A2P08572 AP004247.1-201ENST00000531556 1289 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 MIR544B-201ENST00000582372 78 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 MTCO2P2-201ENST00000591258 225 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AL391001.1-201ENST00000602747 715 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 DUSP12P1-201ENST00000612874 516 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC022709.1-201ENST00000615967 87 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A2P08572 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL4A2P08572 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 RNU6-1280P-201ENST00000365211 107 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL4A2P08572 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A2P08572 AC106883.1-201ENST00000418805 562 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC092648.1-201ENST00000425870 423 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 RPS25P9-201ENST00000435591 252 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 MTND1P28-201ENST00000435623 950 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 FABP5P14-201ENST00000437273 393 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 CALM1P1-201ENST00000442082 433 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 MRPL42P6-201ENST00000486397 371 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A2P08572 RNA5SP165-201ENST00000517142 115 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A2P08572 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A2P08572 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 AL138976.2-201ENST00000563989 694 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 UBE2L4-201ENST00000587688 464 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 AC008121.1-201ENST00000603244 268 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC025594.3-201ENST00000613068 790 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A2P08572 AP002791.1-201ENST00000623291 381 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC010608.3-201ENST00000625048 527 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC099654.9-201ENST00000637055 678 ntBASIC1.32□□□□□ -2.2
COL4A2P08572 AC092125.1-201ENST00000562568 1995 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
COL4A2P08572 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 ZNF29P-201ENST00000225587 168 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-1-201ENST00000383898 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-42P-201ENST00000384165 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-36P-201ENST00000384172 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-4P-201ENST00000384205 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-5P-201ENST00000384238 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-3P-201ENST00000384314 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-2-201ENST00000384627 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-906P-201ENST00000384700 70 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-19P-201ENST00000384718 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-9-201ENST00000384776 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-33P-201ENST00000384793 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-1242P-201ENST00000391052 103 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AL139397.2-201ENST00000404529 772 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU2-62P-201ENST00000410868 191 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 ISCA1P1-201ENST00000426679 387 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A2P08572 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.31□□□□□ -2.2
COL4A2P08572 TIMM9P1-201ENST00000436122 256 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 MTND4P25-201ENST00000441039 533 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AC084364.2-201ENST00000546924 395 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 MRPS36P5-201ENST00000551909 298 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A2P08572 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A2P08572 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A2P08572 MIR4765-201ENST00000585007 77 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 RNU6-6P-201ENST00000606623 107 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AC097468.3-201ENST00000607956 456 ntBASIC1.31□□□□□ -2.2
COL4A2P08572 AC090970.3-201ENST00000612566 866 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms