Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HLA-DPB1P04440 AC010378.1-201ENST00000619270 362 ntBASIC1.82□□□□□ -2.12
HLA-DPB1P04440 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL596028.1-201ENST00000326971 197 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 Y_RNA.33-201ENST00000362591 102 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 RNU6-1280P-201ENST00000365211 107 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL031779.1-201ENST00000415663 330 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL135786.1-201ENST00000415892 214 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL451074.3-201ENST00000437709 472 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 PGBD4P3-201ENST00000440731 581 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL078601.1-201ENST00000444542 271 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 MTCO2P29-201ENST00000465212 189 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 RPL9P6-201ENST00000492764 598 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC022493.1-201ENST00000492984 337 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 Y_RNA.672-201ENST00000516289 104 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 RNU2-46P-201ENST00000517038 113 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC022616.3-201ENST00000523940 148 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC135279.1-201ENST00000543493 504 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 LINC00933-203ENST00000559812 219 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 DEFB131E-202ENST00000602581 683 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC174048.1-201ENST00000603389 144 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 uc_338.14-201ENST00000613162 166 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AC007494.3-201ENST00000624660 743 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
HLA-DPB1P04440 ZNF658B-202ENST00000615961 3375 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RNA5SP126-201ENST00000365092 109 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RNU1-52P-201ENST00000384190 164 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 SNORA24.1-201ENST00000384401 135 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RPL23AP32-201ENST00000395315 459 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MRPL42P2-201ENST00000403169 426 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 CIR1P3-201ENST00000405137 479 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RN7SKP223-201ENST00000410582 62 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 CYCSP48-201ENST00000417124 323 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC016831.2-201ENST00000417179 352 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 ELOCP4-201ENST00000420090 333 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MTND4P20-201ENST00000424125 869 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 BX276092.3-201ENST00000424182 230 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AL139415.2-201ENST00000431968 163 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC104850.1-201ENST00000435940 476 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AL445567.1-201ENST00000439121 144 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MTND1P30-201ENST00000441241 901 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 USP9YP8-201ENST00000441913 500 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 USP9YP15-201ENST00000442391 422 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AL583843.1-201ENST00000456070 346 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 TRBV12-1-201ENST00000479785 344 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC108078.2-201ENST00000510750 236 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RNU6-123P-201ENST00000516163 102 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC060788.1-201ENST00000521318 469 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 CBX3P7-201ENST00000532876 502 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 RPS3AP23-202ENST00000574601 686 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MIR4513-201ENST00000581077 86 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC105245.1-201ENST00000581934 244 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AL158032.1-201ENST00000605401 106 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MIR6840-201ENST00000611937 71 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC024581.2-201ENST00000619986 252 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DPB1P04440 AC024940.5-201ENST00000622889 474 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MIR7157-201ENST00000635801 60 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 MTND4P4-201ENST00000439033 1366 ntBASIC1.8□□□□□ -2.12
HLA-DPB1P04440 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DPB1P04440 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DPB1P04440 AC103710.2-202ENST00000641454 2853 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 RNU1-72P-201ENST00000362976 153 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 U8.3-201ENST00000363321 132 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 RNU6-748P-201ENST00000384648 107 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 CISD1P1-201ENST00000393907 327 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 RPS3AP36-201ENST00000398190 775 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 FTH1P15-201ENST00000406984 280 ntBASIC1.79□□□□□ -2.12
HLA-DPB1P04440 Y_RNA.598-201ENST00000410480 95 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms