Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC021231.3-201ENST00000558497 370 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.41□□□□□ -1.7
PDGFAP04085 MIR3160-1-201ENST00000577972 85 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 ADAM3A-203ENST00000461344 2157 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 AC063976.2-201ENST00000425667 3556 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDGFAP04085 AC087190.4-201ENST00000574616 8334 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PDGFAP04085 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDGFAP04085 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.7
PDGFAP04085 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFAP04085 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PDGFAP04085 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFAP04085 HAUS6P2-201ENST00000433254 2404 ntBASIC4.4□□□□□ -1.7
PDGFAP04085 Y_RNA.569-201ENST00000384749 103 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 RNU4-30P-201ENST00000410245 143 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFAP04085 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFAP04085 AL358075.3-201ENST00000426289 226 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFAP04085 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFAP04085 RPL7AP61-201ENST00000443410 636 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 HMGN2P10-201ENST00000448085 265 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 AC011276.1-201ENST00000469688 323 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 AC117440.1-201ENST00000474107 571 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 SNORA25.14-201ENST00000516481 132 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 CKS1BP7-201ENST00000522230 235 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 CBX3P4-201ENST00000538909 354 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 MIR4423-201ENST00000580922 80 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 AL591034.3-201ENST00000605511 685 ntBASIC4.4□□□□□ -1.71
PDGFAP04085 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFAP04085 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFAP04085 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFAP04085 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFAP04085 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFAP04085 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.4□□□□□ -1.71
PDGFAP04085 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFAP04085 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFAP04085 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 AL672296.1-201ENST00000427780 2158 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 SNORA25.1-201ENST00000362326 128 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 SNORD115-8-201ENST00000363856 82 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 SNORD115-38-201ENST00000365037 82 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 RNU6-514P-201ENST00000384208 107 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 RNU6-1001P-201ENST00000411265 100 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 AC069285.2-201ENST00000440210 275 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFAP04085 AC109327.1-201ENST00000471666 403 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 RPL26P26-201ENST00000480251 434 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFAP04085 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFAP04085 RNU2-58P-201ENST00000516403 183 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 RNU6-928P-201ENST00000516876 104 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFAP04085 AP001781.1-201ENST00000530977 207 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 UBL5P4-201ENST00000562584 236 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 MIR5699-201ENST00000578903 90 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFAP04085 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFAP04085 AL162424.1-201ENST00000602325 221 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFAP04085 AC015813.4-201ENST00000610469 179 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 AL110115.1-201ENST00000614396 364 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 AC011944.2-201ENST00000624440 683 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFAP04085 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 AC007656.2-201ENST00000624902 4547 ntBASIC4.39□□□□□ -1.71
PDGFAP04085 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFAP04085 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PDGFAP04085 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFAP04085 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFAP04085 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFAP04085 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 RNU5F-3P-201ENST00000363767 117 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 Y_RNA.230-201ENST00000364348 109 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 Y_RNA.286-201ENST00000364813 102 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 Y_RNA.464-201ENST00000384282 110 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 MIR329-1-201ENST00000385028 80 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 U3.19-201ENST00000390893 196 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 HLFP1-201ENST00000402375 499 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFAP04085 COX6B1P7-201ENST00000430845 235 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AL392103.1-201ENST00000447000 198 ntBASIC4.38□□□□□ -1.71
PDGFAP04085 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFAP04085 RNU7-120P-201ENST00000459334 63 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms