Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC092001.1-201ENST00000453012 261 ntBASIC3.13□□□□□ -1.91
DDX58O95786 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX58O95786 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
DDX58O95786 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX58O95786 AC104806.1-201ENST00000508720 308 ntBASIC3.13□□□□□ -1.91
DDX58O95786 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX58O95786 RNU6-581P-201ENST00000516214 105 ntBASIC3.13□□□□□ -1.91
DDX58O95786 SNORA31.18-201ENST00000517043 134 ntBASIC3.13□□□□□ -1.91
DDX58O95786 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX58O95786 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX58O95786 AC023043.3-201ENST00000593113 385 ntBASIC3.13□□□□□ -1.91
DDX58O95786 DEFB131E-202ENST00000602581 683 ntBASIC3.13□□□□□ -1.91
DDX58O95786 AC007938.3-201ENST00000604965 623 ntBASIC3.13□□□□□ -1.91
DDX58O95786 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX58O95786 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.12□□□□□ -1.91
DDX58O95786 RNU6-1287P-201ENST00000362914 107 ntBASIC3.12□□□□□ -1.91
DDX58O95786 RNU6-1060P-201ENST00000384664 107 ntBASIC3.12□□□□□ -1.91
DDX58O95786 Y_RNA.576-201ENST00000384781 102 ntBASIC3.12□□□□□ -1.91
DDX58O95786 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX58O95786 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
DDX58O95786 CALM2P2-201ENST00000428512 440 ntBASIC3.12□□□□□ -1.91
DDX58O95786 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.12□□□□□ -1.91
DDX58O95786 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX58O95786 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
DDX58O95786 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
DDX58O95786 AP003072.2-201ENST00000527756 676 ntBASIC3.12□□□□□ -1.91
DDX58O95786 AC009063.1-201ENST00000563342 702 ntBASIC3.12□□□□□ -1.91
DDX58O95786 AC008521.1-201ENST00000587471 187 ntBASIC3.12□□□□□ -1.91
DDX58O95786 OR1M4P-201ENST00000589199 287 ntBASIC3.12□□□□□ -1.91
DDX58O95786 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
DDX58O95786 SEPT14P19-203ENST00000633205 211 ntBASIC3.12□□□□□ -1.91
DDX58O95786 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX58O95786 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX58O95786 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX58O95786 AC092447.7-201ENST00000422212 1621 ntBASIC3.11□□□□□ -1.91
DDX58O95786 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX58O95786 SNORA68.1-201ENST00000364537 132 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RN7SKP226-201ENST00000364912 300 ntBASIC3.11□□□□□ -1.91
DDX58O95786 SNORD115-7-201ENST00000365306 82 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RNU6-898P-201ENST00000365627 104 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RNU6-1083P-201ENST00000384022 107 ntBASIC3.11□□□□□ -1.91
DDX58O95786 MIR454-201ENST00000390180 115 ntBASIC3.11□□□□□ -1.91
DDX58O95786 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RNU2-16P-201ENST00000410712 136 ntBASIC3.11□□□□□ -1.91
DDX58O95786 MTCO3P41-201ENST00000414801 328 ntBASIC3.11□□□□□ -1.91
DDX58O95786 PTGES3P4-201ENST00000426243 356 ntBASIC3.11□□□□□ -1.91
DDX58O95786 MYL8P-204ENST00000431574 518 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AC002486.1-201ENST00000435098 391 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RPL21P2-201ENST00000440049 481 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX58O95786 RPS29P15-201ENST00000458329 171 ntBASIC3.11□□□□□ -1.91
DDX58O95786 RNU7-182P-201ENST00000459009 62 ntBASIC3.11□□□□□ -1.91
DDX58O95786 EIF4EP3-201ENST00000498782 656 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX58O95786 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DDX58O95786 FAM92A1P1-201ENST00000528023 890 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX58O95786 MIR548AC-201ENST00000585049 88 ntBASIC3.11□□□□□ -1.91
DDX58O95786 NDUFA8P1-201ENST00000605525 367 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX58O95786 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AC136475.10-201ENST00000620253 385 ntBASIC3.11□□□□□ -1.91
DDX58O95786 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX58O95786 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX58O95786 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DDX58O95786 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX58O95786 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX58O95786 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DDX58O95786 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX58O95786 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX58O95786 RNU4-75P-201ENST00000364621 146 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RNU6-259P-201ENST00000383999 107 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RNU6-116P-201ENST00000384042 109 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RNU2-66P-201ENST00000410650 161 ntBASIC3.1□□□□□ -1.91
DDX58O95786 MTATP6P18-201ENST00000417994 673 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX58O95786 RPS15AP9-201ENST00000439856 381 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RPL32P28-201ENST00000443577 397 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX58O95786 AC107626.1-201ENST00000471084 183 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RN7SL636P-201ENST00000497504 294 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AC234781.5-201ENST00000508429 271 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX58O95786 RNU5F-8P-201ENST00000515941 111 ntBASIC3.1□□□□□ -1.91
DDX58O95786 RNA5SP24-201ENST00000516478 95 ntBASIC3.1□□□□□ -1.91
DDX58O95786 SCARNA11.3-201ENST00000517276 130 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX58O95786 AC091544.4-201ENST00000555268 342 ntBASIC3.1□□□□□ -1.91
DDX58O95786 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX58O95786 AL391813.1-201ENST00000603098 260 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AL138889.2-201ENST00000603883 242 ntBASIC3.1□□□□□ -1.91
DDX58O95786 AC069234.5-201ENST00000611056 416 ntBASIC3.1□□□□□ -1.91
DDX58O95786 HULC.1-201ENST00000612720 240 ntBASIC3.1□□□□□ -1.91
DDX58O95786 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX58O95786 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX58O95786 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX58O95786 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX58O95786 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
DDX58O95786 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX58O95786 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms