Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC074117.2-201ENST00000417130 397 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA2O43364 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA2O43364 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 AL162591.2-201ENST00000449634 317 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 snoU13.6-201ENST00000458785 104 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 RN7SL517P-201ENST00000462240 305 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 RPS23P7-201ENST00000466210 444 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 AC114982.1-201ENST00000469402 321 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 Y_RNA.797-201ENST00000515977 94 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 RNU6-966P-201ENST00000516479 104 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 AC009127.3-201ENST00000570531 403 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA2O43364 DEFB117-201ENST00000602356 141 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA2O43364 AC006971.1-201ENST00000407916 4486 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXA2O43364 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA2O43364 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXA2O43364 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA2O43364 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.57
HOXA2O43364 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA2O43364 NOL8P1-201ENST00000508336 3529 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA2O43364 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA2O43364 Y_RNA.127-201ENST00000363386 109 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 SNORD113.2-201ENST00000364166 89 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 SNORA36A-201ENST00000384221 132 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 TOMM22P1-201ENST00000418578 312 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 AC092047.1-201ENST00000424997 240 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA2O43364 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA2O43364 CR383656.8-201ENST00000549046 145 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 AC004467.1-201ENST00000615678 330 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 AC091932.3-201ENST00000624223 323 ntBASIC5.21□□□□□ -1.58
HOXA2O43364 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA2O43364 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA2O43364 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA2O43364 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA2O43364 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA2O43364 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 ZFRP1-201ENST00000457579 2970 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HOXA2O43364 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA2O43364 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 RNA5SP397-201ENST00000391323 118 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 RN7SKP267-201ENST00000410381 285 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 RPS26P42-201ENST00000413485 326 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 RPL30P13-201ENST00000418873 348 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 EBAG9P1-201ENST00000418955 543 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 HMGN2P30-201ENST00000423237 256 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 AC078809.1-201ENST00000427601 140 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 FTH1P6-201ENST00000430768 320 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 RNU6-1333P-201ENST00000516162 93 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA2O43364 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA2O43364 MIR5699-201ENST00000578903 90 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 MIR4715-201ENST00000584117 79 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA2O43364 AL133412.1-201ENST00000380194 2992 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA2O43364 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA2O43364 SRP72P2-201ENST00000344851 1979 ntBASIC5.2□□□□□ -1.58
HOXA2O43364 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA2O43364 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXA2O43364 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
HOXA2O43364 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA2O43364 SNORA70.2-201ENST00000364506 135 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 RNU6-818P-201ENST00000364837 108 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 RNU1-100P-201ENST00000365255 165 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HOXA2O43364 MIR129-1-201ENST00000384972 72 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 MIR325-201ENST00000385260 98 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 MIR513C-201ENST00000401352 84 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA2O43364 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA2O43364 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA2O43364 AC125238.1-201ENST00000448842 249 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AL137159.1-201ENST00000452808 512 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 RN7SL558P-201ENST00000497468 299 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 Vault.1-201ENST00000516474 102 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA2O43364 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXA2O43364 AL359198.2-201ENST00000611836 194 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AC083809.1-201ENST00000615051 472 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AC099654.7-201ENST00000635788 2127 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 AL034408.1-202ENST00000636088 415 ntBASIC5.19□□□□□ -1.58
HOXA2O43364 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms