Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL359880.1-201ENST00000621879 266 ntBASIC2.37□□□□□ -2.03
CDX4O14627 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.37□□□□□ -2.03
CDX4O14627 AC110079.1-202ENST00000635213 138 ntBASIC2.37□□□□□ -2.03
CDX4O14627 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.37□□□□□ -2.03
CDX4O14627 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDX4O14627 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CDX4O14627 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDX4O14627 AC008264.2-201ENST00000610193 3731 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC093831.2-201ENST00000624393 3427 ntBASIC2.36□□□□□ -2.03
CDX4O14627 SNORD56.2-201ENST00000363242 71 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNA5SP456-201ENST00000364002 114 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU6-960P-201ENST00000364056 120 ntBASIC2.36□□□□□ -2.03
CDX4O14627 Y_RNA.256-201ENST00000364594 104 ntBASIC2.36□□□□□ -2.03
CDX4O14627 SNORA51.4-201ENST00000364993 124 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU1-100P-201ENST00000365255 165 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU6-1283P-201ENST00000365314 105 ntBASIC2.36□□□□□ -2.03
CDX4O14627 U8.9-201ENST00000365667 134 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.36□□□□□ -2.03
CDX4O14627 SNORD21-201ENST00000383953 95 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU6-1103P-201ENST00000384150 107 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU2-36P-201ENST00000410361 191 ntBASIC2.36□□□□□ -2.03
CDX4O14627 MTCO2P19-201ENST00000427513 598 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.36□□□□□ -2.03
CDX4O14627 AC244505.4-201ENST00000434905 287 ntBASIC2.36□□□□□ -2.03
CDX4O14627 SSXP5-201ENST00000443473 287 ntBASIC2.36□□□□□ -2.03
CDX4O14627 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX4O14627 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX4O14627 snoU13.28-201ENST00000459235 104 ntBASIC2.36□□□□□ -2.03
CDX4O14627 TRBV1-201ENST00000476502 284 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC019235.1-201ENST00000503847 207 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.36□□□□□ -2.03
CDX4O14627 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 Y_RNA.704-201ENST00000516851 102 ntBASIC2.36□□□□□ -2.03
CDX4O14627 RNU6-143P-201ENST00000516942 93 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AP006587.4-201ENST00000526053 529 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AP001893.2-201ENST00000526949 202 ntBASIC2.36□□□□□ -2.03
CDX4O14627 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX4O14627 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX4O14627 SUB1P2-201ENST00000556401 297 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC026464.5-201ENST00000562497 722 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 AC092325.1-201ENST00000566449 554 ntBASIC2.36□□□□□ -2.03
CDX4O14627 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.36□□□□□ -2.03
CDX4O14627 AC020895.1-201ENST00000595362 272 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AC104237.2-201ENST00000612456 443 ntBASIC2.36□□□□□ -2.03
CDX4O14627 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.36□□□□□ -2.03
CDX4O14627 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 HSPA8P4-201ENST00000511877 1920 ntBASIC2.36□□□□□ -2.03
CDX4O14627 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDX4O14627 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDX4O14627 AC010680.1-201ENST00000590024 3590 ntBASIC2.36□□□□□ -2.03
CDX4O14627 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CDX4O14627 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDX4O14627 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDX4O14627 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDX4O14627 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.35□□□□□ -2.03
CDX4O14627 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDX4O14627 Y_RNA.159-201ENST00000363674 87 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RNU6-1090P-201ENST00000364065 94 ntBASIC2.35□□□□□ -2.03
CDX4O14627 Y_RNA.381-201ENST00000365666 102 ntBASIC2.35□□□□□ -2.03
CDX4O14627 Y_RNA.450-201ENST00000384198 113 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RNU6-456P-201ENST00000384493 107 ntBASIC2.35□□□□□ -2.03
CDX4O14627 MIR888-201ENST00000401186 77 ntBASIC2.35□□□□□ -2.03
CDX4O14627 AC099548.1-201ENST00000421443 426 ntBASIC2.35□□□□□ -2.03
CDX4O14627 AL353193.1-201ENST00000421444 268 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RPL23AP30-201ENST00000432419 501 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RPL36AP6-201ENST00000435770 321 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RBMX2P4-201ENST00000441256 376 ntBASIC2.35□□□□□ -2.03
CDX4O14627 MTATP6P30-201ENST00000443540 664 ntBASIC2.35□□□□□ -2.03
CDX4O14627 UBBP3-201ENST00000445497 241 ntBASIC2.35□□□□□ -2.03
CDX4O14627 Z96811.1-201ENST00000445880 108 ntBASIC2.35□□□□□ -2.03
CDX4O14627 MTCO3P38-201ENST00000468910 766 ntBASIC2.35□□□□□ -2.03
CDX4O14627 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.35□□□□□ -2.03
CDX4O14627 AC023194.1-201ENST00000493084 308 ntBASIC2.35□□□□□ -2.03
CDX4O14627 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.35□□□□□ -2.03
CDX4O14627 AC116337.1-201ENST00000509680 687 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.35□□□□□ -2.03
CDX4O14627 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
CDX4O14627 RNU6-677P-201ENST00000516914 101 ntBASIC2.35□□□□□ -2.03
CDX4O14627 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.35□□□□□ -2.03
CDX4O14627 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.35□□□□□ -2.03
CDX4O14627 Z84480.1-201ENST00000605131 311 ntBASIC2.35□□□□□ -2.03
CDX4O14627 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.35□□□□□ -2.03
CDX4O14627 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDX4O14627 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
CDX4O14627 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDX4O14627 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
CDX4O14627 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX4O14627 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDX4O14627 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
CDX4O14627 UBE2L2-201ENST00000254302 429 ntBASIC2.34□□□□□ -2.03
CDX4O14627 RNU6-270P-201ENST00000364131 105 ntBASIC2.34□□□□□ -2.03
CDX4O14627 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CDX4O14627 AC068050.1-201ENST00000394891 380 ntBASIC2.34□□□□□ -2.03
CDX4O14627 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.34□□□□□ -2.03
CDX4O14627 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms