Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AF186190.1-201ENST00000517470 480 ntBASIC4.5□□□□□ -1.69
SOX1O00570 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX1O00570 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX1O00570 AC006065.5-201ENST00000623427 349 ntBASIC4.5□□□□□ -1.69
SOX1O00570 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX1O00570 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 AP001273.1-201ENST00000624493 3152 ntBASIC4.5□□□□□ -1.69
SOX1O00570 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX1O00570 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX1O00570 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX1O00570 RNU6-1301P-201ENST00000362724 104 ntBASIC4.49□□□□□ -1.69
SOX1O00570 RNU6-336P-201ENST00000364891 107 ntBASIC4.49□□□□□ -1.69
SOX1O00570 RNU6-290P-201ENST00000365212 101 ntBASIC4.49□□□□□ -1.69
SOX1O00570 Y_RNA.506-201ENST00000384494 102 ntBASIC4.49□□□□□ -1.69
SOX1O00570 RNU6-125P-201ENST00000384505 107 ntBASIC4.49□□□□□ -1.69
SOX1O00570 MIR1290-201ENST00000408735 78 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AC017079.2-201ENST00000416102 485 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX1O00570 AC244098.2-201ENST00000422068 99 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX1O00570 AC007560.1-201ENST00000426912 237 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX1O00570 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX1O00570 CYCSP35-201ENST00000451978 304 ntBASIC4.49□□□□□ -1.69
SOX1O00570 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX1O00570 AC092798.1-201ENST00000458542 409 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 RNU6-1256P-201ENST00000516539 103 ntBASIC4.49□□□□□ -1.69
SOX1O00570 AP006245.1-201ENST00000522549 120 ntBASIC4.49□□□□□ -1.69
SOX1O00570 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.49□□□□□ -1.69
SOX1O00570 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX1O00570 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX1O00570 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX1O00570 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SOX1O00570 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 AC006971.1-201ENST00000407916 4486 ntBASIC4.48□□□□□ -1.69
SOX1O00570 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX1O00570 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX1O00570 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX1O00570 AC124916.1-201ENST00000444020 547 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AL078601.1-201ENST00000444542 271 ntBASIC4.48□□□□□ -1.69
SOX1O00570 PTMAP3-201ENST00000447474 330 ntBASIC4.48□□□□□ -1.69
SOX1O00570 TOMM22P6-201ENST00000465035 409 ntBASIC4.48□□□□□ -1.69
SOX1O00570 RPS26P21-201ENST00000475397 348 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AC139453.3-201ENST00000493276 369 ntBASIC4.48□□□□□ -1.69
SOX1O00570 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX1O00570 AC010265.1-201ENST00000513509 211 ntBASIC4.48□□□□□ -1.69
SOX1O00570 RNU6-572P-201ENST00000516724 80 ntBASIC4.48□□□□□ -1.69
SOX1O00570 SNORA31.18-201ENST00000517043 134 ntBASIC4.48□□□□□ -1.69
SOX1O00570 SNORA31.20-201ENST00000517111 133 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AC087441.2-201ENST00000529141 262 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AC024405.2-202ENST00000532731 184 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX1O00570 AC087499.8-201ENST00000578406 226 ntBASIC4.48□□□□□ -1.69
SOX1O00570 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.48□□□□□ -1.69
SOX1O00570 AL713866.2-201ENST00000603579 219 ntBASIC4.48□□□□□ -1.69
SOX1O00570 Z83818.1-201ENST00000603584 150 ntBASIC4.48□□□□□ -1.69
SOX1O00570 AL359693.1-201ENST00000614959 2407 ntBASIC4.48□□□□□ -1.69
SOX1O00570 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX1O00570 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
SOX1O00570 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX1O00570 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 AC233981.2-201ENST00000611524 1614 ntBASIC4.47□□□□□ -1.69
SOX1O00570 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX1O00570 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.47□□□□□ -1.69
SOX1O00570 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SOX1O00570 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 Y_RNA.44-201ENST00000362676 108 ntBASIC4.47□□□□□ -1.69
SOX1O00570 Y_RNA.76-201ENST00000362931 109 ntBASIC4.47□□□□□ -1.69
SOX1O00570 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SOX1O00570 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 RNU6-1140P-201ENST00000410517 106 ntBASIC4.47□□□□□ -1.69
SOX1O00570 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.47□□□□□ -1.69
SOX1O00570 AL358453.1-201ENST00000422522 250 ntBASIC4.47□□□□□ -1.69
SOX1O00570 RPS6P12-201ENST00000432491 726 ntBASIC4.47□□□□□ -1.69
SOX1O00570 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX1O00570 ANP32BP2-201ENST00000454525 545 ntBASIC4.47□□□□□ -1.69
SOX1O00570 HSPE1P25-201ENST00000455484 251 ntBASIC4.47□□□□□ -1.69
SOX1O00570 COX6CP14-201ENST00000469580 174 ntBASIC4.47□□□□□ -1.69
SOX1O00570 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX1O00570 AC106707.2-201ENST00000484182 374 ntBASIC4.47□□□□□ -1.69
SOX1O00570 AP004371.1-201ENST00000525240 214 ntBASIC4.47□□□□□ -1.69
SOX1O00570 MRPS36P4-201ENST00000534436 298 ntBASIC4.47□□□□□ -1.69
SOX1O00570 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms