Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
H3BM21 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3BM21 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
H3BM21 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.84□□□□□ -1.64
H3BM21 PHKBP1-201ENST00000450951 1951 ntBASIC4.84□□□□□ -1.64
H3BM21 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
H3BM21 AC026951.1-201ENST00000559530 2459 ntBASIC4.83□□□□□ -1.64
H3BM21 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3BM21 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3BM21 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3BM21 UBE2L2-201ENST00000254302 429 ntBASIC4.83□□□□□ -1.64
H3BM21 RNA5SP191-201ENST00000362585 102 ntBASIC4.83□□□□□ -1.64
H3BM21 Y_RNA.319-201ENST00000365138 92 ntBASIC4.83□□□□□ -1.64
H3BM21 AC068538.1-201ENST00000376856 336 ntBASIC4.83□□□□□ -1.64
H3BM21 Y_RNA.393-201ENST00000383936 102 ntBASIC4.83□□□□□ -1.64
H3BM21 RNU6-178P-201ENST00000384631 104 ntBASIC4.83□□□□□ -1.64
H3BM21 MIR15B-201ENST00000385045 98 ntBASIC4.83□□□□□ -1.64
H3BM21 SNORD78.1-201ENST00000390866 65 ntBASIC4.83□□□□□ -1.64
H3BM21 SNORA75.5-201ENST00000391291 81 ntBASIC4.83□□□□□ -1.64
H3BM21 RNU6-592P-201ENST00000411333 103 ntBASIC4.83□□□□□ -1.64
H3BM21 EDDM3CP-201ENST00000415977 425 ntBASIC4.83□□□□□ -1.64
H3BM21 RPS27P1-201ENST00000450552 247 ntBASIC4.83□□□□□ -1.64
H3BM21 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.83□□□□□ -1.64
H3BM21 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3BM21 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.83□□□□□ -1.64
H3BM21 RN7SKP12-201ENST00000516275 143 ntBASIC4.83□□□□□ -1.64
H3BM21 RNU6-155P-201ENST00000516347 100 ntBASIC4.83□□□□□ -1.64
H3BM21 AP001880.2-201ENST00000538233 448 ntBASIC4.83□□□□□ -1.64
H3BM21 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
H3BM21 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.83□□□□□ -1.64
H3BM21 MIR4697-201ENST00000582977 78 ntBASIC4.83□□□□□ -1.64
H3BM21 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.83□□□□□ -1.64
H3BM21 AC005255.1-201ENST00000593748 216 ntBASIC4.83□□□□□ -1.64
H3BM21 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.83□□□□□ -1.64
H3BM21 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.83□□□□□ -1.64
H3BM21 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
H3BM21 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
H3BM21 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.82□□□□□ -1.64
H3BM21 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3BM21 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3BM21 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3BM21 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.82□□□□□ -1.64
H3BM21 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
H3BM21 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
H3BM21 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3BM21 Y_RNA.280-201ENST00000364765 112 ntBASIC4.82□□□□□ -1.64
H3BM21 RNU6-339P-201ENST00000384310 107 ntBASIC4.82□□□□□ -1.64
H3BM21 RNU6-146P-201ENST00000384602 108 ntBASIC4.82□□□□□ -1.64
H3BM21 Y_RNA.572-201ENST00000384757 98 ntBASIC4.82□□□□□ -1.64
H3BM21 MIR616-201ENST00000385293 97 ntBASIC4.82□□□□□ -1.64
H3BM21 RNU6-554P-201ENST00000410466 106 ntBASIC4.82□□□□□ -1.64
H3BM21 RAB9AP3-201ENST00000412737 573 ntBASIC4.82□□□□□ -1.64
H3BM21 RPL31P2-201ENST00000413849 377 ntBASIC4.82□□□□□ -1.64
H3BM21 AL158156.1-201ENST00000422509 473 ntBASIC4.82□□□□□ -1.64
H3BM21 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.82□□□□□ -1.64
H3BM21 CYCSP32-201ENST00000440548 321 ntBASIC4.82□□□□□ -1.64
H3BM21 RAB9AP1-201ENST00000449393 573 ntBASIC4.82□□□□□ -1.64
H3BM21 EIF4A1P11-201ENST00000451239 222 ntBASIC4.82□□□□□ -1.64
H3BM21 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.82□□□□□ -1.64
H3BM21 RPS4XP13-201ENST00000483219 789 ntBASIC4.82□□□□□ -1.64
H3BM21 IGLV2-34-201ENST00000490007 283 ntBASIC4.82□□□□□ -1.64
H3BM21 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.82□□□□□ -1.64
H3BM21 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.82□□□□□ -1.64
H3BM21 MIR378J-201ENST00000611988 109 ntBASIC4.82□□□□□ -1.64
H3BM21 AP001318.4-201ENST00000616637 121 ntBASIC4.82□□□□□ -1.64
H3BM21 AL360181.4-201ENST00000621752 134 ntBASIC4.82□□□□□ -1.64
H3BM21 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
H3BM21 MIR4275-201ENST00000636486 87 ntBASIC4.82□□□□□ -1.64
H3BM21 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
H3BM21 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.82□□□□□ -1.64
H3BM21 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
H3BM21 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3BM21 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H3BM21 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.81□□□□□ -1.64
H3BM21 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.81□□□□□ -1.64
H3BM21 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.81□□□□□ -1.64
H3BM21 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
H3BM21 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
H3BM21 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.81□□□□□ -1.64
H3BM21 RNA5SP505-201ENST00000364748 108 ntBASIC4.81□□□□□ -1.64
H3BM21 RNU6-1286P-201ENST00000383871 107 ntBASIC4.81□□□□□ -1.64
H3BM21 MIR548A1-201ENST00000385041 97 ntBASIC4.81□□□□□ -1.64
H3BM21 RNU6-159P-201ENST00000391080 106 ntBASIC4.81□□□□□ -1.64
H3BM21 RNU6-1199P-201ENST00000411249 104 ntBASIC4.81□□□□□ -1.64
H3BM21 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.81□□□□□ -1.64
H3BM21 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.81□□□□□ -1.64
H3BM21 GEMIN8P3-201ENST00000445417 720 ntBASIC4.81□□□□□ -1.64
H3BM21 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.81□□□□□ -1.64
H3BM21 PTMAP3-201ENST00000447474 330 ntBASIC4.81□□□□□ -1.64
H3BM21 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 RPL23AP53-201ENST00000521854 457 ntBASIC4.81□□□□□ -1.64
H3BM21 AL590392.1-201ENST00000604960 446 ntBASIC4.81□□□□□ -1.64
H3BM21 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.81□□□□□ -1.64
H3BM21 AC083809.1-201ENST00000615051 472 ntBASIC4.81□□□□□ -1.64
H3BM21 AC068700.1-201ENST00000565862 3754 ntBASIC4.81□□□□□ -1.64
H3BM21 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H3BM21 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms