Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01548A6NM66 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01548A6NM66 MIR5696-201ENST00000578474 85 ntBASIC3.1□□□□□ -1.91
LINC01548A6NM66 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01548A6NM66 AL020997.2-201ENST00000602607 184 ntBASIC3.1□□□□□ -1.91
LINC01548A6NM66 AC025946.2-201ENST00000603398 234 ntBASIC3.1□□□□□ -1.91
LINC01548A6NM66 AC009318.2-201ENST00000610917 651 ntBASIC3.1□□□□□ -1.91
LINC01548A6NM66 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
LINC01548A6NM66 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01548A6NM66 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01548A6NM66 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01548A6NM66 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01548A6NM66 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01548A6NM66 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01548A6NM66 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01548A6NM66 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 SNORD50.1-201ENST00000362987 71 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 RNU4-50P-201ENST00000364361 141 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01548A6NM66 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 RNU6-708P-201ENST00000384217 107 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 Y_RNA.551-201ENST00000384661 102 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 MIR30B-201ENST00000384850 88 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 RNU6-700P-201ENST00000391043 107 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 MTCO3P29-201ENST00000432119 779 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 HMGB1P37-201ENST00000439613 609 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL078601.1-201ENST00000444542 271 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC079354.2-201ENST00000453523 154 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC092798.1-201ENST00000458542 409 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 SNORA31.8-201ENST00000516327 108 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 SNORA40.15-201ENST00000516884 107 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 RNA5SP291-201ENST00000517222 105 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 TRAV28-201ENST00000557548 323 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL360157.1-201ENST00000565962 87 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC005255.1-201ENST00000593748 216 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL390123.1-201ENST00000603216 237 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 SRGNP1-201ENST00000603392 451 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL591424.2-201ENST00000617023 128 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AL159153.1-201ENST00000619688 317 ntBASIC3.09□□□□□ -1.91
LINC01548A6NM66 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.92
LINC01548A6NM66 HSPA8P1-201ENST00000425843 1833 ntBASIC3.09□□□□□ -1.92
LINC01548A6NM66 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
LINC01548A6NM66 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
LINC01548A6NM66 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC106871.1-201ENST00000568324 3102 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC010615.1-201ENST00000594254 1764 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 Y_RNA.60-201ENST00000362831 98 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 Y_RNA.376-201ENST00000365638 108 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 Y_RNA.526-201ENST00000384572 110 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 MIR325-201ENST00000385260 98 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 SNORA69.1-201ENST00000390904 137 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 MIR1302-6-201ENST00000408466 90 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 MIR1183-201ENST00000408856 89 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 Y_RNA.592-201ENST00000410274 109 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 RNA5SP494-201ENST00000410653 129 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AL590383.1-201ENST00000428602 75 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 RNU6-1132P-201ENST00000459214 107 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 snoU109.2-201ENST00000459316 135 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 RPS29P27-201ENST00000463711 170 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 RN7SL323P-201ENST00000494712 295 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC109329.1-201ENST00000518744 317 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 HSPE1P5-201ENST00000561489 272 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC006557.5-201ENST00000603126 811 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AL645944.1-201ENST00000603857 493 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC004805.2-201ENST00000605382 482 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AL354798.1-201ENST00000622505 329 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC130454.1-201ENST00000622948 401 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
LINC01548A6NM66 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LINC01548A6NM66 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
LINC01548A6NM66 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01548A6NM66 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.07□□□□□ -1.92
LINC01548A6NM66 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01548A6NM66 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms