Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-926P-201ENST00000384075 107 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 RNU6-541P-201ENST00000384709 110 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AC073901.1-201ENST00000462471 408 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AF186190.1-201ENST00000517470 480 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AP002392.1-201ENST00000537692 208 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 CR383656.8-201ENST00000549046 145 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 RNA5SP191-201ENST00000362585 102 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 RNA5SP189-201ENST00000364920 115 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SNORD116-20-201ENST00000384529 92 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 MIR550A3-201ENST00000390735 95 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC007969.2-201ENST00000441891 191 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SSXP4-201ENST00000451349 245 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC010326.1-201ENST00000462726 602 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC005921.1-201ENST00000510589 286 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC091874.1-201ENST00000511402 339 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 RNA5SP468-201ENST00000516782 93 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC027288.2-201ENST00000553028 243 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 MIR5571-201ENST00000577998 113 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AL162424.1-201ENST00000602325 221 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AC019159.1-201ENST00000605094 187 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AL138963.2-201ENST00000605137 226 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 BRDTP1-201ENST00000605735 677 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 MIR6891-201ENST00000618788 93 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 USP8P1-201ENST00000494673 3183 ntBASIC3.87□□□□□ -1.79
SHISA3A0PJX4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHISA3A0PJX4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC090740.1-201ENST00000623193 2262 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RNU1-100P-201ENST00000365255 165 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RNU6-21P-201ENST00000384710 107 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RN7SKP267-201ENST00000410381 285 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC074117.2-201ENST00000417130 397 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 MTCO1P5-201ENST00000433573 344 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 VDAC1P3-201ENST00000434069 851 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AL110118.1-201ENST00000553543 400 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AL049539.1-201ENST00000611964 459 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC005296.1-201ENST00000616145 209 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 U3.53-201ENST00000628922 216 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 SNORA43.4-201ENST00000629559 138 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 FAM35BP-202ENST00000497389 3337 ntBASIC3.86□□□□□ -1.79
SHISA3A0PJX4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SHISA3A0PJX4 AC018555.1-201ENST00000567548 1980 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RNA5SP361-201ENST00000362686 118 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 SNORD115-8-201ENST00000363856 82 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.230-201ENST00000364348 109 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RNA5SP515-201ENST00000364570 118 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RNA5SP513-201ENST00000364648 118 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 SNORD115-38-201ENST00000365037 82 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 U8.10-201ENST00000384260 133 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 SNORA19-201ENST00000384737 128 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms