Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL136520.1-202ENST00000555494 763 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC023813.2-201ENST00000564321 469 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SUB1P3-201ENST00000564581 315 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AP001981.2-201ENST00000603241 418 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.6-201ENST00000603753 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.11-201ENST00000604059 253 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC008162.1-201ENST00000604718 254 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.1-201ENST00000604752 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.2-201ENST00000604983 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.5-201ENST00000605253 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.4-201ENST00000605279 254 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.12-201ENST00000605291 253 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.8-201ENST00000605353 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 PRR13P7-201ENST00000605538 430 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL670379.7-201ENST00000605823 252 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC006270.3-201ENST00000605967 1036 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC012360.2-201ENST00000609349 391 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AL512506.1-201ENST00000613918 449 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 AC064859.1-201ENST00000624741 174 ntBASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV12-1A0A0B4J245 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-661P-201ENST00000362409 107 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 Y_RNA.67-201ENST00000362870 100 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-1284P-201ENST00000363701 100 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-224P-201ENST00000384055 107 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR504-201ENST00000385065 83 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA48.1-201ENST00000390879 135 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 SNORA40C-201ENST00000391285 128 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR1284-201ENST00000408337 120 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MTCO1P17-201ENST00000411522 491 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL359704.1-201ENST00000411586 781 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MTND4P3-201ENST00000417829 541 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RAC1P6-201ENST00000423911 575 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RPL23AP76-201ENST00000441860 458 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 NEFMP1-201ENST00000443423 1006 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU1-123P-201ENST00000458950 160 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MED28P2-201ENST00000475771 317 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL121594.1-201ENST00000475906 575 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC008837.2-201ENST00000513076 418 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 RNVU1-2-201ENST00000516326 135 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AP003049.1-201ENST00000529418 457 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC022616.8-201ENST00000533569 253 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC025678.1-201ENST00000567861 338 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 WISP1-OT1-201ENST00000602893 642 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL358072.1-201ENST00000604156 575 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC091834.1-201ENST00000614543 472 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR8074-201ENST00000615081 81 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 uc_338.15-201ENST00000615470 191 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL590808.1-201ENST00000618696 141 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 AL512643.1-201ENST00000635735 524 ntBASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV12-1A0A0B4J245 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 MIR26B-201ENST00000362251 77 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-944P-201ENST00000364023 107 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-60P-201ENST00000364792 103 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 RNU6-166P-201ENST00000384371 107 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 RPS12P24-201ENST00000412619 387 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AC083875.1-201ENST00000419509 405 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AL591704.2-201ENST00000421658 181 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 MTND5P25-201ENST00000430499 799 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 AC104058.1-201ENST00000448028 297 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 MTCO1P27-201ENST00000448269 226 ntBASIC0.86□□□□□ -2.27
TRAV12-1A0A0B4J245 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms