Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-572P-201ENST00000516724 80 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AP006587.4-201ENST00000526053 529 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC011494.1-201ENST00000596454 237 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AL606834.3-201ENST00000602615 496 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC087045.1-201ENST00000605856 382 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 PART1_2.1-201ENST00000612397 250 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC008121.3-201ENST00000618726 433 ntBASIC1.59□□□□□ -2.15
USH1CQ9Y6N9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.59□□□□□ -2.16
USH1CQ9Y6N9 AC138393.1-203ENST00000327086 343 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 RNU1-23P-201ENST00000363361 144 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC127391.1-201ENST00000411737 98 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC244636.1-201ENST00000421152 228 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 RPL7P54-201ENST00000438336 674 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 BTF3P15-201ENST00000455606 336 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC018868.1-201ENST00000491307 315 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AP005597.4-201ENST00000526762 229 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC026271.5-201ENST00000577873 130 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AL596327.1-201ENST00000603629 213 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 BNIP3P9-201ENST00000603714 553 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 BNIP3P10-201ENST00000605360 577 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 NDUFA8P1-201ENST00000605525 367 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AL121895.2-201ENST00000619558 447 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
USH1CQ9Y6N9 TEX21P-201ENST00000447107 1476 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 RNU6-1032P-201ENST00000384100 107 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 RNU6-14P-201ENST00000384630 106 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AL117351.1-201ENST00000438864 766 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 NEFMP1-201ENST00000443423 1006 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 RPL39P36-201ENST00000490784 156 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 MTND4P2-201ENST00000507767 1203 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AC009902.1-201ENST00000519351 183 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 DEFB108A-201ENST00000530110 222 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 OR5B19P-201ENST00000531766 928 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AL670379.10-201ENST00000604330 253 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AL670379.9-201ENST00000605428 253 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AC107952.2-201ENST00000606048 486 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
USH1CQ9Y6N9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 RNU6-288P-201ENST00000363690 104 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AL136310.1-201ENST00000404926 654 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 RN7SKP266-201ENST00000410232 287 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AC116353.3-201ENST00000511215 249 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 RNA5SP216-201ENST00000516111 123 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 RNU5B-3P-201ENST00000516601 115 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AP000907.2-201ENST00000530827 353 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 Z99571.1-201ENST00000636677 394 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 AC099654.8-201ENST00000637757 681 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 MTND5P10-201ENST00000603719 1809 ntBASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
USH1CQ9Y6N9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 RNU6-462P-201ENST00000362659 105 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 Y_RNA.192-201ENST00000363977 102 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 RNA5SP99-201ENST00000364020 114 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 RNU6-1257P-201ENST00000384625 110 ntBASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.55□□□□□ -2.16
USH1CQ9Y6N9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms