Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-189P-201ENST00000516120 101 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 SNORA70.16-201ENST00000516390 95 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-914P-201ENST00000516749 109 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP468-201ENST00000516782 93 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 MIR5692A1-201ENST00000580523 69 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RMST_7.1-201ENST00000621935 268 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AC099506.2-201ENST00000623074 221 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.15□□□□□ -1.9
RAI2Q9Y5P3 RNU6-512P-201ENST00000364438 103 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 Y_RNA.238-201ENST00000364441 102 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 RNU6-522P-201ENST00000364497 107 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 RNU6-715P-201ENST00000365204 103 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 MIR301A-201ENST00000385261 86 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AL645937.1-202ENST00000421799 937 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 MTND4P28-201ENST00000426217 387 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 VN1R17P-201ENST00000472048 1090 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AL160314.1-201ENST00000490836 438 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 CCDC34P1-201ENST00000507441 517 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 TTC39CP1-201ENST00000512513 755 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AL118558.2-201ENST00000556294 238 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 AL022345.1-201ENST00000607292 135 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.15□□□□□ -1.91
RAI2Q9Y5P3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 SNORD113-7-201ENST00000363762 77 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 RNU6-741P-201ENST00000383889 107 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 EI24P2-201ENST00000397776 1076 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AL356432.1-201ENST00000405809 419 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 RNU2-37P-201ENST00000410695 177 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 USP9YP20-201ENST00000419224 558 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 PDCL2P1-201ENST00000419302 352 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 HSPE1P1-201ENST00000421494 318 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AL592045.1-201ENST00000429867 352 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 RPL23AP69-201ENST00000431134 458 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 UBE2V1P7-201ENST00000446395 340 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 FAM206BP-201ENST00000510179 541 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC104136.1-201ENST00000512969 394 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 RNA5SP290-201ENST00000517133 127 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 MIR4742-201ENST00000581069 85 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AL117336.2-201ENST00000602435 335 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 C8orf59P2-201ENST00000603441 271 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC098826.3-201ENST00000603823 466 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AP003400.5-201ENST00000624827 617 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 AL359697.1-201ENST00000624879 587 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 Z99571.1-201ENST00000636677 394 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 TPTEP1-208ENST00000636884 213 ntBASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAI2Q9Y5P3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 DEFB109C-201ENST00000382575 264 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 DEFB109B-201ENST00000382656 264 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.13□□□□□ -1.91
RAI2Q9Y5P3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms