Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AL035413.2-201ENST00000604801 525 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 UCA1.1-201ENST00000620952 75 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC002064.3-201ENST00000623448 346 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 GABRG2-229ENST00000641017 3628 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC103988.1-201ENST00000566382 2177 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 AC110774.1-201ENST00000623567 2018 ntBASIC3.05□□□□□ -1.92
HCN3Q9P1Z3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 RNU6-451P-201ENST00000362921 107 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 RNU6-384P-201ENST00000364900 104 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 RNU6-607P-201ENST00000411283 108 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 BX682237.1-201ENST00000415016 335 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 WASF1P1-201ENST00000447560 1131 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC005261.5-201ENST00000596280 355 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 NRBF2P5-201ENST00000603087 788 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC024614.3-201ENST00000637860 256 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HCN3Q9P1Z3 AL079305.1-201ENST00000623159 3008 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AL161651.1-201ENST00000440882 223 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC115115.1-201ENST00000449927 248 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 NIPA2P5-201ENST00000452282 464 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 RNU7-167P-201ENST00000459160 62 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC010265.1-201ENST00000513509 211 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC234778.2-201ENST00000566241 354 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC008739.2-201ENST00000597006 317 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC087045.1-201ENST00000605856 382 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC011890.2-201ENST00000613393 294 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 MIR6134-201ENST00000617606 109 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 AC091903.1-201ENST00000624322 454 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 MIR3662-201ENST00000637030 95 ntBASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HCN3Q9P1Z3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC010889.1-201ENST00000566193 2666 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 NFU1P2-201ENST00000448700 469 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC109925.1-201ENST00000478069 331 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 RPL38P4-201ENST00000502376 214 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC091885.1-201ENST00000506658 268 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 RN7SKP57-201ENST00000517248 293 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AC245166.1-201ENST00000521012 253 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 CENPUP1-201ENST00000526649 1202 ntBASIC3.02□□□□□ -1.93
HCN3Q9P1Z3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms